DCAF7
DDB1- and CUL4-associated factor 7
Also known as: DCAF7_HUMAN, HAN11, SWAN-1, WDR68
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P61962
- Gene
- DCAF7
- Ensembl
- ENSG00000136485
- Chromosome
- 17
- Canonical length
- 342 aa
- Protein class
- Predicted intracellular proteins
- Subcellular location
- Nucleoplasm,Cytosol
OverviewNCBI Gene
This gene encodes a protein with multiple WD40 repeats which facilitate protein-protein interactions and thereby enable the assembly of multiprotein complexes. This protein has been shown to function as a scaffold protein for protein complexes involved in kinase signaling. This highly conserved gene is present in eukaryotic plants, fungi, and animals. The ortholog of this gene was first identified in plants as a key regulator of anthocyanin biosynthesis and flower pigmentation. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2014]
Canonical amino-acid sequenceUniProt
342 residues, UniProt reviewed canonical sequence.
>P61962|DCAF7
1 MSLHGKRKEI YKYEAPWTVY AMNWSVRPDK RFRLALGSFV EEYNNKVQLV GLDEESSEFI
61 CRNTFDHPYP TTKLMWIPDT KGVYPDLLAT SGDYLRVWRV GETETRLECL LNNNKNSDFC
121 APLTSFDWNE VDPYLLGTSS IDTTCTIWGL ETGQVLGRVN LVSGHVKTQL IAHDKEVYDI
181 AFSRAGGGRD MFASVGADGS VRMFDLRHLE HSTIIYEDPQ HHPLLRLCWN KQDPNYLATM
241 AMDGMEVVIL DVRVPCTPVA RLNNHRACVN GIAWAPHSSC HICTAADDHQ ALIWDIQQMP
301 RAIEDPILAY TAEGEINNVQ WASTQPDWIA ICYNNCLEIL RVLocalizationUniProt · AlphaFold · HPA
Whether an antibody against DCAF7 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.24
- Highest tissue expression
- 35 nTPM
Expression across tissuesHPA
Tissue
- thymus: 35 nTPM
- parathyroid gland: 35 nTPM
- tonsil: 31 nTPM
- lymph node: 29 nTPM
- retina: 28 nTPM
- small intestine: 26 nTPM
Single-cell type
- microglia: 92 nCPM
- proximal tubule cells: 89 nCPM
- renal collecting duct intercalated cells: 83 nCPM
- choroid plexus epithelial cells: 80 nCPM
- distal convoluted tubule cells: 79 nCPM
- renal connecting tubule cells: 76 nCPM
Immune cell
- eosinophil: 26 nTPM
- non-classical monocyte: 19 nTPM
- intermediate monocyte: 17 nTPM
- myeloid DC: 17 nTPM
- basophil: 15 nTPM
- classical monocyte: 14 nTPM
Brain region
- hypothalamus: 54 nTPM
- spinal cord: 53 nTPM
- midbrain: 50 nTPM
- thalamus: 49 nTPM
- medulla oblongata: 49 nTPM
- white matter: 49 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.35
- gnomAD pLI
- 0.93
- gnomAD missense Z
- 2.74
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 9% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- WD40 repeat
- WD40/YVTN repeat-like-containing domain superfamily
- WD40 repeat, conserved site
- WD40-repeat-containing domain superfamily
- WD domain, G-beta repeat
- WD repeat-containing protein DCAF7-like
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of DCAF7 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads DCAF7 as an antibody target. Whether an autoantibody or antibody against DCAF7 could matter depends on whether native DCAF7 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
DCAF7 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label DCAF7 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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