RAD51
DNA repair protein RAD51 homolog 1
Also known as: BRCC5, FANCR, HsRad51, HsT16930, RAD51_HUMAN, RAD51A, RECA
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q06609
- Gene
- RAD51
- Ensembl
- ENSG00000051180
- Chromosome
- 15
- Canonical length
- 339 aa
- Protein class
- Cancer-related genes, Disease related genes, Human disease related genes, Predicted intracellular proteins
- Subcellular location
- Nucleoli,Mitochondria,Cytosol
- Quaternary structure
- Homooligomer
OverviewNCBI Gene
The protein encoded by this gene is a member of the RAD51 protein family. RAD51 family members are highly similar to bacterial RecA and Saccharomyces cerevisiae Rad51, and are known to be involved in the homologous recombination and repair of DNA. This protein can interact with the ssDNA-binding protein RPA and RAD52, and it is thought to play roles in homologous pairing and strand transfer of DNA. This protein is also found to interact with BRCA1 and BRCA2, which may be important for the cellular response to DNA damage. BRCA2 is shown to regulate both the intracellular localization and DNA-binding ability of this protein. Loss of these controls following BRCA2 inactivation may be a key event leading to genomic instability and tumorigenesis. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Aug 2009]
Canonical amino-acid sequenceUniProt
339 residues, UniProt reviewed canonical sequence.
>Q06609|RAD51
1 MAMQMQLEAN ADTSVEEESF GPQPISRLEQ CGINANDVKK LEEAGFHTVE AVAYAPKKEL
61 INIKGISEAK ADKILAEAAK LVPMGFTTAT EFHQRRSEII QITTGSKELD KLLQGGIETG
121 SITEMFGEFR TGKTQICHTL AVTCQLPIDR GGGEGKAMYI DTEGTFRPER LLAVAERYGL
181 SGSDVLDNVA YARAFNTDHQ TQLLYQASAM MVESRYALLI VDSATALYRT DYSGRGELSA
241 RQMHLARFLR MLLRLADEFG VAVVITNQVV AQVDGAAMFA ADPKKPIGGN IIAHASTTRL
301 YLRKGRGETR ICKIYDSPCL PEAEAMFAIN ADGVGDAKDLocalizationUniProt · AlphaFold · HPA
Whether an antibody against RAD51 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.29
- Highest tissue expression
- 23 nTPM
Expression across tissuesHPA
Tissue
- testis: 23 nTPM
- thymus: 15 nTPM
- tonsil: 13 nTPM
- lymph node: 10 nTPM
- bone marrow: 9.9 nTPM
- rectum: 8.5 nTPM
Single-cell type
- extravillous trophoblasts: 89 nCPM
- oocytes: 83 nCPM
- migrating cytotrophoblasts: 61 nCPM
- late primary spermatocytes: 57 nCPM
- early primary spermatocytes: 54 nCPM
- epicardial cells: 52 nCPM
Immune cell
- T-reg: 5.9 nTPM
- memory CD8 T-cell: 3.1 nTPM
- memory CD4 T-cell: 2.5 nTPM
- gdT-cell: 2.4 nTPM
- NK-cell: 1.8 nTPM
- eosinophil: 1.7 nTPM
Brain region
- cerebellum: 4.9 nTPM
- cerebral cortex: 2.9 nTPM
- choroid plexus: 2.8 nTPM
- pons: 2.5 nTPM
- hypothalamus: 2.4 nTPM
- white matter: 2.4 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about RAD51.
Disease | AllUniProt
Conditions RAD51 is implicated in, by any mechanism.
- Breast cancer (BC) MIM:114480
- Mirror movements 2 (MRMV2) MIM:614508
- Fanconi anemia, complementation group R (FANCR) MIM:617244
Disease | GeneticClinVar
14 pathogenic / likely-pathogenic of 504 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Fanconi anemia complementation group R
- Mirror movements 2
- RAD51-related disorder
- Familial cancer of breast
- Inborn genetic diseases
ReferencesPubMed · IEDB
Publications for RAD51 from three distinct lines of evidence, kept separate because they answer different questions: whether antibodies are directed at the protein, whether a B-cell epitope has been mapped on it, and whether a T-cell epitope has. Each is labelled with its source.
Reference: AutoantibodyPubMed
2 publications
- Synthetic lethality of a cell-penetrating anti-RAD51 antibody in PTEN-deficient melanoma and glioma cells.
2019 · Oncotarget · RCR 0.8 · 22 citations - Autoantibodies in sera of pancreatic cancer patients identify recombination factor Rad51 as a tumour-associated antigen.
2002 · J Cancer Res Clin Oncol · RCR 0.7 · 33 citations
Sources: PubMed — antigen-level antibody evidence from a custom retrieval. Records matching a controlled set of autoantibody terms (the MeSH descriptors Autoantibodies and Autoantigens, with title and abstract term variants) were obtained through NCBI E-utilities, and their titles and abstracts parsed for constructions that direct an antibody at a named protein rather than for co-occurrence. Captured names were resolved against UniProt nomenclature and each antigen adjudicated individually against the source text. Bibliographic records from PubMed and MeSH, U.S. National Library of Medicine; citation metrics from NIH iCite (Hutchins et al., PLoS Biology 2016). Titles link to PubMed; abstracts are not reproduced here. The NLM does not endorse this analysis.
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.64
- gnomAD pLI
- 0.03
- gnomAD missense Z
- 2.62
- DepMap mean gene effect
- -1.46
- DepMap dependency class
- pan
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cellular response to camptothecin
- cellular response to cisplatin
- cellular response to gamma radiation
- cellular response to hydroxyurea
- cellular response to ionizing radiation
- chromosome organization involved in meiotic cell cycle
- DNA damage response
- DNA recombinase assembly
- DNA recombination
- DNA repair
- DNA strand invasion
- double-strand break repair involved in meiotic recombination
- double-strand break repair via homologous recombination
- interstrand cross-link repair
- meiotic cell cycle
- mitotic recombination
- mitotic recombination-dependent replication fork processing
- reciprocal meiotic recombination
- regulation of DNA damage checkpoint
- regulation of double-strand break repair via homologous recombination
- replication fork processing
- replication-born double-strand break repair via sister chromatid exchange
- response to toxic substance
- response to X-ray
- response to xenobiotic stimulus
- telomere maintenance via recombination
- telomere maintenance via telomere lengthening
- response to glucoside
Molecular functions
- ATP binding
- ATP-dependent activity, acting on DNA
- ATP-dependent DNA damage sensor activity
- chromatin binding
- DNA polymerase binding
- DNA strand exchange activity
- double-stranded DNA binding
- enzyme binding
- identical protein binding
- single-stranded DNA binding
- single-stranded DNA helicase activity
Cellular components
- centrosome
- chromatin
- chromosome, telomeric region
- condensed chromosome
- condensed nuclear chromosome
- cytoplasm
- cytosol
- lateral element
- male germ cell nucleus
- mitochondrial matrix
- mitochondrion
- nuclear chromosome
- nuclear ubiquitin ligase complex
- nucleolus
- nucleoplasm
- nucleus
- perinuclear region of cytoplasm
- PML body
- presynaptic intermediate filament cytoskeleton
- protein-containing complex
- protein-DNA complex
- site of double-strand break
Protein domainsUniProt · Pfam · InterPro
- AAA+ ATPase domain
- DNA repair Rad51/transcription factor NusA, alpha-helical
- Rad51-like, C-terminal
- DNA recombination and repair protein, RecA-like
- DNA recombination and repair protein RecA, monomer-monomer interface
- DNA recombination and repair protein RecA-like, ATP-binding domain
- P-loop containing nucleoside triphosphate hydrolase
- Rad51
- Helix-hairpin-helix domain
- DNA recombination/repair protein Rad51
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of RAD51 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads RAD51 as an antibody target. Whether an autoantibody or antibody against RAD51 could matter depends on whether native RAD51 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
RAD51 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label RAD51 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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