CDC20
Cell division cycle protein 20 homolog
Also known as: CDC20_HUMAN, CDC20A, p55CDC
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q12834
- Gene
- CDC20
- Ensembl
- ENSG00000117399
- Chromosome
- 1
- Canonical length
- 499 aa
- Protein class
- Cancer-related genes, Plasma proteins, Predicted intracellular proteins, Transporters
- Subcellular location
- Nucleoplasm,Cytosol
OverviewNCBI Gene
CDC20 appears to act as a regulatory protein interacting with several other proteins at multiple points in the cell cycle. It is required for two microtubule-dependent processes, nuclear movement prior to anaphase and chromosome separation. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
499 residues, UniProt reviewed canonical sequence.
>Q12834|CDC20
1 MAQFAFESDL HSLLQLDAPI PNAPPARWQR KAKEAAGPAP SPMRAANRSH SAGRTPGRTP
61 GKSSSKVQTT PSKPGGDRYI PHRSAAQMEV ASFLLSKENQ PENSQTPTKK EHQKAWALNL
121 NGFDVEEAKI LRLSGKPQNA PEGYQNRLKV LYSQKATPGS SRKTCRYIPS LPDRILDAPE
181 IRNDYYLNLV DWSSGNVLAV ALDNSVYLWS ASSGDILQLL QMEQPGEYIS SVAWIKEGNY
241 LAVGTSSAEV QLWDVQQQKR LRNMTSHSAR VGSLSWNSYI LSSGSRSGHI HHHDVRVAEH
301 HVATLSGHSQ EVCGLRWAPD GRHLASGGND NLVNVWPSAP GEGGWVPLQT FTQHQGAVKA
361 VAWCPWQSNV LATGGGTSDR HIRIWNVCSG ACLSAVDAHS QVCSILWSPH YKELISGHGF
421 AQNQLVIWKY PTMAKVAELK GHTSRVLSLT MSPDGATVAS AAADETLRLW RCFELDPARR
481 REREKASAAK SSLIHQGIRLocalizationUniProt · AlphaFold · HPA
Whether an antibody against CDC20 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.35
- Highest tissue expression
- 51 nTPM
Expression across tissuesHPA
Tissue
- bone marrow: 51 nTPM
- thymus: 49 nTPM
- tonsil: 48 nTPM
- testis: 47 nTPM
- lymph node: 30 nTPM
- esophagus: 27 nTPM
Single-cell type
- late primary spermatocytes: 259 nCPM
- extravillous trophoblasts: 148 nCPM
- esophageal basal cells: 131 nCPM
- early spermatids: 121 nCPM
- migrating cytotrophoblasts: 120 nCPM
- erythrocyte progenitors: 117 nCPM
Immune cell
- T-reg: 12 nTPM
- NK-cell: 9.6 nTPM
- memory B-cell: 4.2 nTPM
- memory CD8 T-cell: 3.5 nTPM
- memory CD4 T-cell: 3.2 nTPM
- total PBMC: 2.8 nTPM
Brain region
- thalamus: 4 nTPM
- medulla oblongata: 2.7 nTPM
- white matter: 2.6 nTPM
- pons: 2.2 nTPM
- basal ganglia: 2 nTPM
- hypothalamus: 2 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about CDC20.
Disease | AllUniProt
Conditions CDC20 is implicated in, by any mechanism.
- Oocyte/zygote/embryo maturation arrest 14 (OZEMA14) MIM:620276
Disease | GeneticClinVar
12 pathogenic / likely-pathogenic of 84 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Oocyte maturation defect 14
- Clear cell carcinoma of kidney
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.84
- gnomAD pLI
- 0
- gnomAD missense Z
- 1.83
- DepMap mean gene effect
- -2.03
- DepMap dependency class
- pan
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 6% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- anaphase-promoting complex-dependent catabolic process
- cell differentiation
- cell division
- mitotic sister chromatid cohesion
- mitotic spindle assembly
- mitotic spindle assembly checkpoint signaling
- nervous system development
- positive regulation of anaphase-promoting complex-dependent catabolic process
- positive regulation of cell population proliferation
- positive regulation of mitotic metaphase/anaphase transition
- positive regulation of synapse maturation
- positive regulation of synaptic plasticity
- positive regulation of ubiquitin protein ligase activity
- protein ubiquitination
- regulation of dendrite development
- regulation of meiotic cell cycle
- regulation of meiotic nuclear division
- regulation of mitotic cell cycle
- metaphase/anaphase transition of cell cycle
- metaphase/anaphase transition of meiosis I
Molecular functions
- anaphase-promoting complex binding
- histone deacetylase binding
- ubiquitin ligase activator activity
- ubiquitin-like ligase-substrate adaptor activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of CDC20 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads CDC20 as an antibody target. Whether an autoantibody or antibody against CDC20 could matter depends on whether native CDC20 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
CDC20 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label CDC20 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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