TMED10
Transmembrane emp24 domain-containing protein 10
Also known as: p23, P24(DELTA), p24d1, p24delta1, TMEDA_HUMAN, TMP21
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P49755
- Gene
- TMED10
- Ensembl
- ENSG00000170348
- Chromosome
- 14
- Canonical length
- 219 aa
- Protein class
- Predicted membrane proteins, Transporters
- Subcellular location
- Golgi apparatus
- Quaternary structure
- Homodimer
OverviewNCBI Gene
This gene is a member of the EMP24/GP25L/p24 family and encodes a protein with a GOLD domain. This type I membrane protein is localized to the plasma membrane and golgi cisternae and is involved in vesicular protein trafficking. The protein is also a member of a heteromeric secretase complex and regulates the complex's gamma-secretase activity without affecting its epsilon-secretase activity. Mutations in this gene have been associated with early-onset familial Alzheimer's disease. This gene has a pseudogene on chromosome 8. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
219 residues, UniProt reviewed canonical sequence.
>P49755|TMED10
1 MSGLSGPPAR RGPFPLALLL LFLLGPRLVL AISFHLPINS RKCLREEIHK DLLVTGAYEI
61 SDQSGGAGGL RSHLKITDSA GHILYSKEDA TKGKFAFTTE DYDMFEVCFE SKGTGRIPDQ
121 LVILDMKHGV EAKNYEEIAK VEKLKPLEVE LRRLEDLSES IVNDFAYMKK REEEMRDTNE
181 STNTRVLYFS IFSMFCLIGL ATWQVFYLRR FFKAKKLIELocalizationUniProt · AlphaFold · HPA
Whether an antibody against TMED10 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 1
- Mean surface accessibility (rSASA)
- 0.42
- Highest tissue expression
- 137 nTPM
Expression across tissuesHPA
Tissue
- thyroid gland: 137 nTPM
- cervix: 130 nTPM
- epididymis: 126 nTPM
- pancreas: 126 nTPM
- salivary gland: 124 nTPM
- liver: 119 nTPM
Single-cell type
- esophageal apical cells: 950 nCPM
- extravillous trophoblasts: 882 nCPM
- epididymal principal cells: 691 nCPM
- plasma cells: 526 nCPM
- lacrimal acinar cells: 499 nCPM
- esophageal suprabasal cells: 472 nCPM
Immune cell
- basophil: 109 nTPM
- NK-cell: 103 nTPM
- MAIT T-cell: 95 nTPM
- total PBMC: 92 nTPM
- plasmacytoid DC: 72 nTPM
- myeloid DC: 63 nTPM
Brain region
- white matter: 96 nTPM
- hypothalamus: 94 nTPM
- medulla oblongata: 93 nTPM
- choroid plexus: 82 nTPM
- spinal cord: 74 nTPM
- pons: 71 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.44
- gnomAD pLI
- 0.86
- gnomAD missense Z
- 2.14
- DepMap mean gene effect
- -0.64
- DepMap dependency class
- common
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- COPI coating of Golgi vesicle
- COPII vesicle coating
- endoplasmic reticulum to Golgi vesicle-mediated transport
- Golgi organization
- intracellular protein transport
- positive regulation of interleukin-1 production
- positive regulation of protein secretion
- regulated exocytosis
- regulation of amyloid-beta formation
- retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
- vesicle cargo loading
- COPI-coated vesicle budding
- cytosol to ERGIC protein transport
- protein localization to ERGIC
- vesicle targeting, to, from or within Golgi
Molecular functions
Cellular components
- cis-Golgi network
- COPI-coated vesicle
- COPII-coated ER to Golgi transport vesicle
- endoplasmic reticulum
- endoplasmic reticulum membrane
- endoplasmic reticulum-Golgi intermediate compartment
- endoplasmic reticulum-Golgi intermediate compartment membrane
- ER to Golgi transport vesicle membrane
- gamma-secretase complex
- Golgi apparatus
- Golgi membrane
- melanosome
- membrane
- plasma membrane
- secretory granule membrane
- trans-Golgi network transport vesicle
- transport vesicle
- zymogen granule membrane
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of TMED10 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads TMED10 as an antibody target. Whether an autoantibody or antibody against TMED10 could matter depends on whether native TMED10 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
TMED10 is annotated at the cell surface, where native TMED10 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label TMED10 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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