STAU1
Double-stranded RNA-binding protein Staufen homolog 1
Also known as: PPP1R150, STAU, STAU1_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- O95793
- Gene
- STAU1
- Ensembl
- ENSG00000124214
- Chromosome
- 20
- Canonical length
- 577 aa
- Protein class
- Plasma proteins, Predicted intracellular proteins
- Subcellular location
- Cytosol
- Quaternary structure
- Homopolymer
OverviewNCBI Gene
Staufen is a member of the family of double-stranded RNA (dsRNA)-binding proteins involved in the transport and/or localization of mRNAs to different subcellular compartments and/or organelles. These proteins are characterized by the presence of multiple dsRNA-binding domains which are required to bind RNAs having double-stranded secondary structures. The human homologue of staufen encoded by STAU, in addition contains a microtubule- binding domain similar to that of microtubule-associated protein 1B, and binds tubulin. The STAU gene product has been shown to be present in the cytoplasm in association with the rough endoplasmic reticulum (RER), implicating this protein in the transport of mRNA via the microtubule network to the RER, the site of translation. [provided by RefSeq, Apr 2020]
Canonical amino-acid sequenceUniProt
577 residues, UniProt reviewed canonical sequence.
>O95793|STAU1
1 MSQVQVQVQN PSAALSGSQI LNKNQSLLSQ PLMSIPSTTS SLPSENAGRP IQNSALPSAS
61 ITSTSAAAES ITPTVELNAL CMKLGKKPMY KPVDPYSRMQ STYNYNMRGG AYPPRYFYPF
121 PVPPLLYQVE LSVGGQQFNG KGKTRQAAKH DAAAKALRIL QNEPLPERLE VNGRESEEEN
181 LNKSEISQVF EIALKRNLPV NFEVARESGP PHMKNFVTKV SVGEFVGEGE GKSKKISKKN
241 AAIAVLEELK KLPPLPAVER VKPRIKKKTK PIVKPQTSPE YGQGINPISR LAQIQQAKKE
301 KEPEYTLLTE RGLPRRREFV MQVKVGNHTA EGTGTNKKVA KRNAAENMLE ILGFKVPQAQ
361 PTKPALKSEE KTPIKKPGDG RKVTFFEPGS GDENGTSNKE DEFRMPYLSH QQLPAGILPM
421 VPEVAQAVGV SQGHHTKDFT RAAPNPAKAT VTAMIARELL YGGTSPTAET ILKNNISSGH
481 VPHGPLTRPS EQLDYLSRVQ GFQVEYKDFP KNNKNEFVSL INCSSQPPLI SHGIGKDVES
541 CHDMAALNIL KLLSELDQQS TEMPRTGNGP MSVCGRCLocalizationUniProt · AlphaFold · HPA
Whether an antibody against STAU1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.49
- Highest tissue expression
- 115 nTPM
Expression across tissuesHPA
Tissue
- liver: 115 nTPM
- kidney: 83 nTPM
- parathyroid gland: 77 nTPM
- pancreas: 66 nTPM
- thyroid gland: 65 nTPM
- fallopian tube: 62 nTPM
Single-cell type
- neutrophils: 471 nCPM
- syncytiotrophoblasts: 280 nCPM
- esophageal apical cells: 267 nCPM
- neutrophil progenitors: 249 nCPM
- oocytes: 249 nCPM
- fallopian tube ciliated cells: 240 nCPM
Immune cell
- neutrophil: 38 nTPM
- basophil: 32 nTPM
- T-reg: 23 nTPM
- non-classical monocyte: 20 nTPM
- eosinophil: 20 nTPM
- MAIT T-cell: 20 nTPM
Brain region
- white matter: 85 nTPM
- medulla oblongata: 85 nTPM
- pons: 84 nTPM
- midbrain: 83 nTPM
- cerebral cortex: 81 nTPM
- spinal cord: 79 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.17
- gnomAD pLI
- 1
- gnomAD missense Z
- 1.93
- DepMap mean gene effect
- -0.05
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 19% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- anterograde dendritic transport of messenger ribonucleoprotein complex
- cellular response to oxidative stress
- germ cell development
- intracellular mRNA localization
- lncRNA-mediated post-transcriptional gene silencing
- modification of postsynaptic structure
- positive regulation by virus of viral protein levels in host cell
- positive regulation of long-term synaptic potentiation
- positive regulation of viral genome replication
- protein localization to synapse
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Double-stranded RNA-binding domain
- Staufen, C-terminal
- Double-stranded RNA-binding domain-containing protein
- Double-stranded RNA binding motif
- Staufen C-terminal domain
- Staufen 1, third double-stranded RNA binding domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of STAU1 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads STAU1 as an antibody target. Whether an autoantibody or antibody against STAU1 could matter depends on whether native STAU1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
STAU1 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label STAU1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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