RAB2A
Ras-related protein Rab-2A
Also known as: RAB2, RAB2A_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P61019
- Gene
- RAB2A
- Ensembl
- ENSG00000104388
- Chromosome
- 8
- Canonical length
- 212 aa
- Protein class
- Enzymes, Predicted intracellular proteins
OverviewNCBI Gene
The protein encoded by this gene belongs to the Rab family, members of which are small molecular weight guanosine triphosphatases (GTPases) that contain highly conserved domains involved in GTP binding and hydrolysis. The Rabs are membrane-bound proteins, involved in vesicular fusion and trafficking. This protein is a resident of pre-Golgi intermediates, and is required for protein transport from the endoplasmic reticulum (ER) to the Golgi complex. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2011]
Canonical amino-acid sequenceUniProt
212 residues, UniProt reviewed canonical sequence.
>P61019|RAB2A
1 MAYAYLFKYI IIGDTGVGKS CLLLQFTDKR FQPVHDLTIG VEFGARMITI DGKQIKLQIW
61 DTAGQESFRS ITRSYYRGAA GALLVYDITR RDTFNHLTTW LEDARQHSNS NMVIMLIGNK
121 SDLESRREVK KEEGEAFARE HGLIFMETSA KTASNVEEAF INTAKEIYEK IQEGVFDINN
181 EANGIKIGPQ HAATNATHAG NQGGQQAGGG CCLocalizationUniProt · AlphaFold · HPA
Whether an antibody against RAB2A can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Other membrane
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.28
- Highest tissue expression
- 113 nTPM
Expression across tissuesHPA
Tissue
- skeletal muscle: 113 nTPM
- esophagus: 83 nTPM
- blood vessel: 77 nTPM
- cerebral cortex: 70 nTPM
- adipose tissue: 67 nTPM
- liver: 66 nTPM
Single-cell type
- esophageal apical cells: 2,186 nCPM
- neutrophils: 1,168 nCPM
- syncytiotrophoblasts: 804 nCPM
- extravillous trophoblasts: 706 nCPM
- esophageal suprabasal cells: 644 nCPM
- neutrophil progenitors: 623 nCPM
Immune cell
- neutrophil: 313 nTPM
- eosinophil: 242 nTPM
- basophil: 231 nTPM
- classical monocyte: 165 nTPM
- non-classical monocyte: 153 nTPM
- intermediate monocyte: 150 nTPM
Brain region
- hypothalamus: 112 nTPM
- cerebral cortex: 107 nTPM
- hippocampal formation: 103 nTPM
- basal ganglia: 103 nTPM
- pons: 97 nTPM
- spinal cord: 91 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.22
- gnomAD pLI
- 0.99
- gnomAD missense Z
- 2.99
- DepMap mean gene effect
- 0
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 15% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- autophagosome-lysosome fusion
- endoplasmic reticulum to Golgi vesicle-mediated transport
- Golgi organization
- macroautophagy
- protein transport
- vesicle-mediated transport
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of RAB2A in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads RAB2A as an antibody target. Whether an autoantibody or antibody against RAB2A could matter depends on whether native RAB2A is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
RAB2A is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label RAB2A as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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