DHX15
ATP-dependent RNA helicase DHX15
Also known as: DBP1, DDX15, DHX15_HUMAN, HRH2, PRP43, PRPF43, PrPp43p
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- O43143
- Gene
- DHX15
- Ensembl
- ENSG00000109606
- Chromosome
- 4
- Canonical length
- 795 aa
- Protein class
- Enzymes, Plasma proteins, Predicted intracellular proteins
- Subcellular location
- Nuclear speckles
OverviewNCBI Gene
The protein encoded by this gene is a putative ATP-dependent RNA helicase implicated in pre-mRNA splicing. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
795 residues, UniProt reviewed canonical sequence.
>O43143|DHX15
1 MSKRHRLDLG EDYPSGKKRA GTDGKDRDRD RDREDRSKDR DRERDRGDRE REREKEKEKE
61 LRASTNAMLI SAGLPPLKAS HSAHSTHSAH STHSTHSAHS THAGHAGHTS LPQCINPFTN
121 LPHTPRYYDI LKKRLQLPVW EYKDRFTDIL VRHQSFVLVG ETGSGKTTQI PQWCVEYMRS
181 LPGPKRGVAC TQPRRVAAMS VAQRVADEMD VMLGQEVGYS IRFEDCSSAK TILKYMTDGM
241 LLREAMNDPL LERYGVIILD EAHERTLATD ILMGVLKEVV RQRSDLKVIV MSATLDAGKF
301 QIYFDNCPLL TIPGRTHPVE IFYTPEPERD YLEAAIRTVI QIHMCEEEEG DLLLFLTGQE
361 EIDEACKRIK REVDDLGPEV GDIKIIPLYS TLPPQQQQRI FEPPPPKKQN GAIGRKVVVS
421 TNIAETSLTI DGVVFVIDPG FAKQKVYNPR IRVESLLVTA ISKASAQQRA GRAGRTRPGK
481 CFRLYTEKAY KTEMQDNTYP EILRSNLGSV VLQLKKLGID DLVHFDFMDP PAPETLMRAL
541 ELLNYLAALN DDGDLTELGS MMAEFPLDPQ LAKMVIASCD YNCSNEVLSI TAMLSVPQCF
601 VRPTEAKKAA DEAKMRFAHI DGDHLTLLNV YHAFKQNHES VQWCYDNFIN YRSLMSADNV
661 RQQLSRIMDR FNLPRRSTDF TSRDYYINIR KALVTGYFMQ VAHLERTGHY LTVKDNQVVQ
721 LHPSTVLDHK PEWVLYNEFV LTTKNYIRTC TDIKPEWLVK IAPQYYDMSN FPQCEAKRQL
781 DRIIAKLQSK EYSQYLocalizationUniProt · AlphaFold · HPA
Whether an antibody against DHX15 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.28
- Highest tissue expression
- 74 nTPM
Expression across tissuesHPA
Tissue
- thymus: 74 nTPM
- bone marrow: 74 nTPM
- tonsil: 67 nTPM
- urinary bladder: 61 nTPM
- lymph node: 56 nTPM
- rectum: 54 nTPM
Single-cell type
- endometrial glandular cells: 230 nCPM
- neutrophil progenitors: 189 nCPM
- monocyte progenitors: 183 nCPM
- endometrial luminal cells: 179 nCPM
- urothelial cells: 165 nCPM
- erythrocyte progenitors: 164 nCPM
Immune cell
- basophil: 58 nTPM
- MAIT T-cell: 40 nTPM
- myeloid DC: 39 nTPM
- non-classical monocyte: 39 nTPM
- T-reg: 39 nTPM
- NK-cell: 37 nTPM
Brain region
- cerebellum: 67 nTPM
- choroid plexus: 66 nTPM
- white matter: 63 nTPM
- basal ganglia: 51 nTPM
- medulla oblongata: 50 nTPM
- thalamus: 48 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.11
- gnomAD pLI
- 1
- gnomAD missense Z
- 5.63
- DepMap mean gene effect
- -1.52
- DepMap dependency class
- pan
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- antiviral innate immune response
- defense response to bacterium
- defense response to virus
- mRNA processing
- mRNA splicing, via spliceosome
- positive regulation of canonical NF-kappaB signal transduction
- response to alkaloid
- response to toxic substance
- RNA splicing
Molecular functions
- ATP binding
- ATP hydrolysis activity
- ATP-dependent activity, acting on RNA
- double-stranded RNA binding
- helicase activity
- RNA binding
- RNA helicase activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Helicase, C-terminal domain-like
- DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
- Helicase-associated domain
- DEAD/DEAH-box helicase domain
- DEAD-box helicase, OB fold
- Helicase superfamily 1/2, ATP-binding domain
- P-loop containing nucleoside triphosphate hydrolase
- Helicase associated domain (HA2), winged-helix domain
- DEAD/DEAH box helicase
- Helicase conserved C-terminal domain
- Helicase associated domain (HA2), winged-helix
- Oligonucleotide/oligosaccharide-binding (OB)-fold
- Helicase associated domain (HA2), ratchet-like
- DHX15, DEXH-box helicase domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of DHX15 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads DHX15 as an antibody target. Whether an autoantibody or antibody against DHX15 could matter depends on whether native DHX15 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
DHX15 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label DHX15 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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