TOLLIP
Toll-interacting protein
Also known as: IL-1RAcPIP, TOLIP_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9H0E2
- Gene
- TOLLIP
- Ensembl
- ENSG00000078902
- Chromosome
- 11
- Canonical length
- 274 aa
- Protein class
- Plasma proteins, Predicted intracellular proteins
- Subcellular location
- Cytosol
OverviewNCBI Gene
This gene encodes a ubiquitin-binding protein that interacts with several Toll-like receptor (TLR) signaling cascade components. The encoded protein regulates inflammatory signaling and is involved in interleukin-1 receptor trafficking and in the turnover of IL1R-associated kinase. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jan 2016]
Canonical amino-acid sequenceUniProt
274 residues, UniProt reviewed canonical sequence.
>Q9H0E2|TOLLIP
1 MATTVSTQRG PVYIGELPQD FLRITPTQQQ RQVQLDAQAA QQLQYGGAVG TVGRLNITVV
61 QAKLAKNYGM TRMDPYCRLR LGYAVYETPT AHNGAKNPRW NKVIHCTVPP GVDSFYLEIF
121 DERAFSMDDR IAWTHITIPE SLRQGKVEDK WYSLSGRQGD DKEGMINLVM SYALLPAAMV
181 MPPQPVVLMP TVYQQGVGYV PITGMPAVCS PGMVPVALPP AAVNAQPRCS EEDLKAIQDM
241 FPNMDQEVIR SVLEAQRGNK DAAINSLLQM GEEPLocalizationUniProt · AlphaFold · HPA
Whether an antibody against TOLLIP can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.4
- Highest tissue expression
- 130 nTPM
Expression across tissuesHPA
Tissue
- cerebral cortex: 130 nTPM
- liver: 107 nTPM
- esophagus: 88 nTPM
- amygdala: 81 nTPM
- hippocampal formation: 73 nTPM
- cerebellum: 73 nTPM
Single-cell type
- late spermatids: 828 nCPM
- esophageal apical cells: 453 nCPM
- esophageal suprabasal cells: 299 nCPM
- late primary spermatocytes: 237 nCPM
- platelets: 216 nCPM
- early spermatids: 159 nCPM
Immune cell
- neutrophil: 180 nTPM
- eosinophil: 140 nTPM
- classical monocyte: 127 nTPM
- intermediate monocyte: 114 nTPM
- non-classical monocyte: 109 nTPM
- myeloid DC: 100 nTPM
Brain region
- cerebral cortex: 191 nTPM
- hippocampal formation: 162 nTPM
- basal ganglia: 151 nTPM
- white matter: 134 nTPM
- amygdala: 132 nTPM
- thalamus: 108 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.72
- gnomAD pLI
- 0.08
- gnomAD missense Z
- 1.12
- DepMap mean gene effect
- 0.08
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- autophagy
- epithelial cell differentiation
- inflammatory response
- innate immune response
- interleukin-1-mediated signaling pathway
- leukocyte activation
- phosphorylation
- positive regulation of protein sumoylation
- protein localization to endosome
- signal transduction
- ubiquitin-dependent protein catabolic process
Molecular functions
- interleukin-1, type I receptor binding
- kinase binding
- molecular adaptor activity
- SUMO binding
- Toll-like receptor binding
- ubiquitin binding
- ubiquitin conjugating enzyme binding
- ubiquitin protein ligase binding
Cellular components
Protein domainsUniProt · Pfam · InterPro
- C2 domain
- Ubiquitin system component CUE
- UBA-like superfamily
- C2 domain superfamily
- C2 domain
- CUE domain
- Toll-interacting protein, C2 domain
- Toll-interacting protein, CUE domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of TOLLIP in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads TOLLIP as an antibody target. Whether an autoantibody or antibody against TOLLIP could matter depends on whether native TOLLIP is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
TOLLIP is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label TOLLIP as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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