ARHGEF7
Rho guanine nucleotide exchange factor 7
Also known as: ARHG7_HUMAN, BETA-PIX, COOL1, DKFZp686C12170, DKFZp761K1021, KIAA0142, Nbla10314, P50, P50BP, P85, P85COOL1, P85SPR, PAK3, PIXB
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q14155
- Gene
- ARHGEF7
- Ensembl
- ENSG00000102606
- Chromosome
- 13
- Canonical length
- 803 aa
- Protein class
- Predicted intracellular proteins
OverviewNCBI Gene
This gene encodes a protein that belongs to a family of cytoplasmic proteins that activate the Ras-like family of Rho proteins by exchanging bound GDP for GTP. It forms a complex with the small GTP binding protein Rac1 and recruits Rac1 to membrane ruffles and to focal adhesions. Multiple alternatively spliced transcript variants encoding different isoforms have been observed for this gene. [provided by RefSeq, Mar 2016]
Canonical amino-acid sequenceUniProt
803 residues, UniProt reviewed canonical sequence.
>Q14155|ARHGEF7
1 MNSAEQTVTW LITLGVLESP KKTISDPEGF LQASLKDGVV LCRLLERLLP GTIEKVYPEP
61 RSESECLSNI REFLRGCGAS LRLELLFPPS QPPQHLVTTI LLSASTFDAN DLYQGQNFNK
121 VLSSLVTLNK VTADIGLGSD SVCARPSSHR IKSFDSLGSQ SLHTRTSKLF QGQYRSLDMT
181 DNSNNQLVVR AKFNFQQTNE DELSFSKGDV IHVTRVEEGG WWEGTLNGRT GWFPSNYVRE
241 VKASEKPVSP KSGTLKSPPK GFDTTAINKS YYNVVLQNIL ETENEYSKEL QTVLSTYLRP
301 LQTSEKLSSA NISYLMGNLE EICSFQQMLV QSLEECTKLP EAQQRVGGCF LNLMPQMKTL
361 YLTYCANHPS AVNVLTEHSE ELGEFMETKG ASSPGILVLT TGLSKPFMRL DKYPTLLKEL
421 ERHMEDYHTD RQDIQKSMAA FKNLSAQCQE VRKRKELELQ ILTEAIRNWE GDDIKTLGNV
481 TYMSQVLIQC AGSEEKNERY LLLFPNVLLM LSASPRMSGF IYQGKLPTTG MTITKLEDSE
541 NHRNAFEISG SMIERILVSC NNQQDLQEWV EHLQKQTKVT SVGNPTIKPH SVPSHTLPSH
601 PVTPSSKHAD SKPAPLTPAY HTLPHPSHHG TPHTTINWGP LEPPKTPKPW SLSCLRPAPP
661 LRPSAALCYK EDLSKSPKTM KKLLPKRKPE RKPSDEEFAS RKSTAALEED AQILKVIEAY
721 CTSAKTRQTL NSTWQGTDLM HNHVLADDDQ PSLDSLGRRS SLSRLEPSDL SEDSDYDSIW
781 TAHSYRMGST SRKSCCSYIS HQNLocalizationUniProt · AlphaFold · HPA
Whether an antibody against ARHGEF7 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.45
- Highest tissue expression
- 71 nTPM
Expression across tissuesHPA
Tissue
- cerebellum: 71 nTPM
- thymus: 61 nTPM
- blood vessel: 58 nTPM
- adipose tissue: 54 nTPM
- cerebral cortex: 53 nTPM
- breast: 50 nTPM
Single-cell type
- vascular smooth muscle cells: 423 nCPM
- thymocytes: 359 nCPM
- oligodendrocytes: 338 nCPM
- innate lymphoid cells: 312 nCPM
- pericytes: 292 nCPM
- corticotrophs: 275 nCPM
Immune cell
- basophil: 30 nTPM
- NK-cell: 12 nTPM
- MAIT T-cell: 10 nTPM
- memory B-cell: 9.9 nTPM
- naive B-cell: 9.2 nTPM
- T-reg: 8.4 nTPM
Brain region
- white matter: 175 nTPM
- cerebral cortex: 160 nTPM
- cerebellum: 155 nTPM
- hippocampal formation: 146 nTPM
- basal ganglia: 141 nTPM
- thalamus: 129 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.19
- gnomAD pLI
- 1
- gnomAD missense Z
- 2.57
- DepMap mean gene effect
- -0.25
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 8% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- ephrin receptor signaling pathway
- focal adhesion assembly
- Golgi organization
- lamellipodium assembly
- nervous system development
- positive regulation of apoptotic process
- positive regulation of fibroblast migration
- positive regulation of lamellipodium morphogenesis
- positive regulation of substrate adhesion-dependent cell spreading
- Rho protein signal transduction
- signal transduction
- negative regulation of microtubule nucleation
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Dbl homology domain
- Guanine-nucleotide dissociation stimulator, CDC24, conserved site
- SH3 domain
- Calponin homology domain
- Pleckstrin homology domain
- PH-like domain superfamily
- Dbl homology (DH) domain superfamily
- SH3-like domain superfamily
- CH domain superfamily
- RhoGEF 6/7, PH domain
- PH domain
- Calponin homology (CH) domain
- RhoGEF domain
- Variant SH3 domain
- Unstructured region two on RhoGEF 6 and 7
- Unstructured region one on RhoGEF 6 and 7
- Rho guanine nucleotide exchange factor 7, SH3 domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of ARHGEF7 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads ARHGEF7 as an antibody target. Whether an autoantibody or antibody against ARHGEF7 could matter depends on whether native ARHGEF7 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
ARHGEF7 is annotated at the cell surface, where native ARHGEF7 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label ARHGEF7 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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