WWOX
WW domain-containing oxidoreductase
Also known as: FOR, SDR41C1, WOX1, WWOX_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9NZC7
- Gene
- WWOX
- Ensembl
- ENSG00000186153
- Chromosome
- 16
- Canonical length
- 414 aa
- Protein class
- Disease related genes, Human disease related genes, Metabolic proteins, Predicted intracellular proteins
- Subcellular location
- Nucleoplasm,Golgi apparatus,Cytosol
OverviewNCBI Gene
This gene encodes a member of the short-chain dehydrogenases/reductases (SDR) protein family. This gene spans the FRA16D common chromosomal fragile site and appears to function as a tumor suppressor gene. Expression of the encoded protein is able to induce apoptosis, while defects in this gene are associated with multiple types of cancer. Disruption of this gene is also associated with autosomal recessive spinocerebellar ataxia 12. Disruption of a similar gene in mouse results in impaired steroidogenesis, additionally suggesting a metabolic function for the protein. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2014]
Canonical amino-acid sequenceUniProt
414 residues, UniProt reviewed canonical sequence.
>Q9NZC7|WWOX
1 MAALRYAGLD DTDSEDELPP GWEERTTKDG WVYYANHTEE KTQWEHPKTG KRKRVAGDLP
61 YGWEQETDEN GQVFFVDHIN KRTTYLDPRL AFTVDDNPTK PTTRQRYDGS TTAMEILQGR
121 DFTGKVVVVT GANSGIGFET AKSFALHGAH VILACRNMAR ASEAVSRILE EWHKAKVEAM
181 TLDLALLRSV QHFAEAFKAK NVPLHVLVCN AATFALPWSL TKDGLETTFQ VNHLGHFYLV
241 QLLQDVLCRS APARVIVVSS ESHRFTDIND SLGKLDFSRL SPTKNDYWAM LAYNRSKLCN
301 ILFSNELHRR LSPRGVTSNA VHPGNMMYSN IHRSWWVYTL LFTLARPFTK SMQQGAATTV
361 YCAAVPELEG LGGMYFNNCC RCMPSPEAQS EETARTLWAL SERLIQERLG SQSGLocalizationUniProt · AlphaFold · HPA
Whether an antibody against WWOX can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.27
- Highest tissue expression
- 20 nTPM
Expression across tissuesHPA
Tissue
- thyroid gland: 20 nTPM
- spinal cord: 19 nTPM
- midbrain: 18 nTPM
- cerebellum: 18 nTPM
- amygdala: 17 nTPM
- basal ganglia: 17 nTPM
Single-cell type
- ependymal cells: 3,105 nCPM
- podocytes: 2,770 nCPM
- choroid plexus epithelial cells: 2,148 nCPM
- bergmann glia: 1,866 nCPM
- astrocytes: 1,696 nCPM
- renal collecting duct intercalated cells: 1,685 nCPM
Immune cell
- plasmacytoid DC: 13 nTPM
- T-reg: 12 nTPM
- MAIT T-cell: 12 nTPM
- gdT-cell: 10 nTPM
- NK-cell: 8.4 nTPM
- naive CD4 T-cell: 8.1 nTPM
Brain region
- white matter: 39 nTPM
- medulla oblongata: 32 nTPM
- cerebellum: 31 nTPM
- midbrain: 31 nTPM
- basal ganglia: 31 nTPM
- hypothalamus: 29 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about WWOX.
Disease | AllUniProt
Conditions WWOX is implicated in, by any mechanism.
- Esophageal cancer (ESCR) MIM:133239
- Spinocerebellar ataxia, autosomal recessive, 12 (SCAR12) MIM:614322
- Developmental and epileptic encephalopathy 28 (DEE28) MIM:616211
Disease | GeneticClinVar
107 pathogenic / likely-pathogenic of 1,140 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Autosomal recessive spinocerebellar ataxia 12
- Developmental and epileptic encephalopathy, 28
- Developmental and epileptic encephalopathy, 1
- Malignant tumor of esophagus
- WWOX-related disorder
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.53
- gnomAD pLI
- 0
- gnomAD missense Z
- -4.44
- DepMap mean gene effect
- 0.05
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cellular response to transforming growth factor beta stimulus
- extrinsic apoptotic signaling pathway
- intrinsic apoptotic signaling pathway by p53 class mediator
- negative regulation of Wnt signaling pathway
- osteoblast differentiation
- positive regulation of extrinsic apoptotic signaling pathway
- positive regulation of extrinsic apoptotic signaling pathway in absence of ligand
- positive regulation of transcription by RNA polymerase II
- skeletal system morphogenesis
- Wnt signaling pathway
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- WW domain
- Short-chain dehydrogenase/reductase SDR
- WW domain superfamily
- NAD(P)-binding domain superfamily
- short chain dehydrogenase
- WW domain
- WWOX, classical (c)-like SDR domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of WWOX in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads WWOX as an antibody target. Whether an autoantibody or antibody against WWOX could matter depends on whether native WWOX is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
WWOX is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label WWOX as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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