TADA2B
Transcriptional adapter 2-beta
Also known as: MGC21874, TAD2B_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q86TJ2
- Gene
- TADA2B
- Ensembl
- ENSG00000173011
- Chromosome
- 4
- Canonical length
- 420 aa
- Protein class
- Predicted intracellular proteins, Transcription factors
- Subcellular location
- Nuclear speckles
OverviewNCBI Gene
TADA2B functions as a transcriptional adaptor protein that potentiates transcription through coordination of histone acetyltransferase (HAT) activity and by linking activation factors to basal transcriptional machinery (Barlev et al., 2003 [PubMed 12972612]).[supplied by OMIM, Apr 2010]
Canonical amino-acid sequenceUniProt
420 residues, UniProt reviewed canonical sequence.
>Q86TJ2|TADA2B
1 MAELGKKYCV YCLAEVSPLR FRCTECQDIE LCPECFSAGA EIGHHRRYHG YQLVDGGRFT
61 LWGPEAEGGW TSREEQLLLD AIEQFGFGNW EDMAAHVGAS RTPQEVMEHY VSMYIHGNLG
121 KACIPDTIPN RVTDHTCPSG GPLSPSLTTP LPPLDISVAE QQQLGYMPLR DDYEIEYDQD
181 AETLISGLSV NYDDDDVEIE LKRAHVDMYV RKLKERQRRK NIARDYNLVP AFLGKDKKEK
241 EKALKRKITK EEKELRLKLR PLYQFMSCKE FDDLFENMHK EKMLRAKIRE LQRYRRNGIT
301 KMEESAEYEA ARHKREKRKE NKNLAGSKRG KEDGKDSEFA AIENLPGFEL LSDREKVLCS
361 SLNLSPARYV TVKTIIIKDH LQKRQGIPSK SRLPSYLDKV LKKRILNFLT ESGWISRDASLocalizationUniProt · AlphaFold · HPA
Whether an antibody against TADA2B can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.39
- Highest tissue expression
- 48 nTPM
Expression across tissuesHPA
Tissue
- skeletal muscle: 48 nTPM
- tongue: 40 nTPM
- bone marrow: 33 nTPM
- pancreas: 29 nTPM
- salivary gland: 23 nTPM
- heart muscle: 19 nTPM
Single-cell type
- late spermatids: 79 nCPM
- thymic myoid cells: 37 nCPM
- neutrophils: 36 nCPM
- retinal pigment epithelial cells: 30 nCPM
- rod photoreceptor cells: 29 nCPM
- breast lactating cells: 26 nCPM
Immune cell
- eosinophil: 6.9 nTPM
- neutrophil: 4.3 nTPM
- gdT-cell: 2.7 nTPM
- memory CD8 T-cell: 2.6 nTPM
- memory B-cell: 2.5 nTPM
- naive CD4 T-cell: 2.3 nTPM
Brain region
- hippocampal formation: 28 nTPM
- cerebral cortex: 26 nTPM
- cerebellum: 24 nTPM
- pons: 23 nTPM
- choroid plexus: 22 nTPM
- thalamus: 22 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.49
- gnomAD pLI
- 0.72
- gnomAD missense Z
- 2.8
- DepMap mean gene effect
- -0.14
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- chromatin remodeling
- positive regulation of DNA-templated transcription
- regulation of DNA repair
- regulation of RNA splicing
- regulation of transcription by RNA polymerase II
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Zinc finger, ZZ-type
- SANT/Myb domain
- Homedomain-like superfamily
- Transcriptional adaptor 2
- SANT domain
- Winged helix-like DNA-binding domain superfamily
- ADA2-like, zinc finger, ZZ-type
- Zinc finger, ZZ-type superfamily
- Transcriptional adapter 2-alpha/beta-like domain
- Myb-like DNA-binding domain
- Transcriptional adapter 2-alpha-like domain
- ADA2 ZZ-type zing finger
- Ada2b, tri-helical domain
- Ada2b-like, C-terminal tri-helical domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of TADA2B in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads TADA2B as an antibody target. Whether an autoantibody or antibody against TADA2B could matter depends on whether native TADA2B is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
TADA2B is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label TADA2B as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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