DMAP1
DNA methyltransferase 1-associated protein 1
Also known as: DMAP1_HUMAN, DNMAP1, DNMTAP1, EAF2, FLJ11543, KIAA1425, MEAF2, SWC4
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9NPF5
- Gene
- DMAP1
- Ensembl
- ENSG00000178028
- Chromosome
- 1
- Canonical length
- 467 aa
- Protein class
- Plasma proteins, Predicted intracellular proteins, Transcription factors
- Subcellular location
- Nucleoplasm,Cytosol
OverviewNCBI Gene
This gene encodes a subunit of several, distinct complexes involved in the repression or activation of transcription. The encoded protein can independently repress transcription and is targeted to replication foci throughout S phase by interacting directly with the N-terminus of DNA methyltransferase 1. During late S phase, histone deacetylase 2 is added to this complex, providing a means to deacetylate histones in transcriptionally inactive heterochromatin following replication. The encoded protein is also a component of the nucleosome acetyltransferase of H4 complex and interacts with the transcriptional corepressor tumor susceptibility gene 101 and the pro-apoptotic death-associated protein 6, among others. Alternatively spliced transcript variants encoding the same protein have been described. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
467 residues, UniProt reviewed canonical sequence.
>Q9NPF5|DMAP1
1 MATGADVRDI LELGGPEGDA ASGTISKKDI INPDKKKSKK SSETLTFKRP EGMHREVYAL
61 LYSDKKDAPP LLPSDTGQGY RTVKAKLGSK KVRPWKWMPF TNPARKDGAM FFHWRRAAEE
121 GKDYPFARFN KTVQVPVYSE QEYQLYLHDD AWTKAETDHL FDLSRRFDLR FVVIHDRYDH
181 QQFKKRSVED LKERYYHICA KLANVRAVPG TDLKIPVFDA GHERRRKEQL ERLYNRTPEQ
241 VAEEEYLLQE LRKIEARKKE REKRSQDLQK LITAADTTAE QRRTERKAPK KKLPQKKEAE
301 KPAVPETAGI KFPDFKSAGV TLRSQRMKLP SSVGQKKIKA LEQMLLELGV ELSPTPTEEL
361 VHMFNELRSD LVLLYELKQA CANCEYELQM LRHRHEALAR AGVLGGPATP ASGPGPASAE
421 PAVTEPGLGP DPKDTIIDVV GAPLTPNSRK RRESASSSSS VKKAKKPLocalizationUniProt · AlphaFold · HPA
Whether an antibody against DMAP1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.52
- Highest tissue expression
- 53 nTPM
Expression across tissuesHPA
Tissue
- adrenal gland: 53 nTPM
- cerebral cortex: 36 nTPM
- skeletal muscle: 35 nTPM
- amygdala: 34 nTPM
- hippocampal formation: 33 nTPM
- basal ganglia: 33 nTPM
Single-cell type
- late spermatids: 101 nCPM
- cytotrophoblasts: 89 nCPM
- oocytes: 74 nCPM
- undifferentiated spermatogonia: 61 nCPM
- syncytiotrophoblasts: 58 nCPM
- migrating cytotrophoblasts: 53 nCPM
Immune cell
- basophil: 45 nTPM
- NK-cell: 44 nTPM
- T-reg: 38 nTPM
- memory CD8 T-cell: 32 nTPM
- MAIT T-cell: 32 nTPM
- memory CD4 T-cell: 31 nTPM
Brain region
- cerebral cortex: 27 nTPM
- cerebellum: 26 nTPM
- white matter: 26 nTPM
- thalamus: 25 nTPM
- basal ganglia: 24 nTPM
- hippocampal formation: 24 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about DMAP1.
Disease | GeneticClinVar
1 pathogenic / likely-pathogenic of 75 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.55
- gnomAD pLI
- 0.04
- gnomAD missense Z
- 2.29
- DepMap mean gene effect
- -1.14
- DepMap dependency class
- common
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- chromatin remodeling
- DNA repair
- negative regulation of DNA-templated transcription
- negative regulation of transcription by RNA polymerase II
- positive regulation of DNA-templated transcription
- positive regulation of double-strand break repair via homologous recombination
- positive regulation of protein import into nucleus
- regulation of apoptotic process
- regulation of cell cycle
- regulation of DNA-templated transcription
- regulation of double-strand break repair
- response to ethanol
Molecular functions
- RNA polymerase II-specific DNA-binding transcription factor binding
- transcription corepressor activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
- DNA methyltransferase 1-associated 1
- SWR1-complex protein 4/DNA methyltransferase 1-associated protein 1
- DAMP1, SANT/Myb-like domain
- DNA methyltransferase 1-associated protein 1 (DMAP1)
- SANT/Myb-like domain of DAMP1
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of DMAP1 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads DMAP1 as an antibody target. Whether an autoantibody or antibody against DMAP1 could matter depends on whether native DMAP1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
DMAP1 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label DMAP1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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