UNC119
Protein unc-119 homolog A
Also known as: HRG4, POC7, POC7A, U119A_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q13432
- Gene
- UNC119
- Ensembl
- ENSG00000109103
- Chromosome
- 17
- Canonical length
- 240 aa
- Protein class
- Disease related genes, Human disease related genes, Predicted intracellular proteins
OverviewNCBI Gene
This gene is specifically expressed in the photoreceptors in the retina. The encoded product shares strong homology with the C. elegans unc119 protein and it can functionally complement the C. elegans unc119 mutation. It has been localized to the photoreceptor synapses in the outer plexiform layer of the retina, and suggested to play a role in the mechanism of photoreceptor neurotransmitter release through the synaptic vesicle cycle. Two transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
240 residues, UniProt reviewed canonical sequence.
>Q13432|UNC119
1 MKVKKGGGGA GTATESAPGP SGQSVAPIPQ PPAESESGSE SEPDAGPGPR PGPLQRKQPI
61 GPEDVLGLQR ITGDYLCSPE ENIYKIDFVR FKIRDMDSGT VLFEIKKPPV SERLPINRRD
121 LDPNAGRFVR YQFTPAFLRL RQVGATVEFT VGDKPVNNFR MIERHYFRNQ LLKSFDFHFG
181 FCIPSSKNTC EHIYDFPPLS EELISEMIRH PYETQSDSFY FVDDRLVMHN KADYSYSGTPLocalizationUniProt · AlphaFold · HPA
Whether an antibody against UNC119 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.4
- Highest tissue expression
- 1,085 nTPM
Expression across tissuesHPA
Tissue
- retina: 1,085 nTPM
- choroid plexus: 66 nTPM
- spleen: 55 nTPM
- testis: 53 nTPM
- bone marrow: 53 nTPM
- cerebral cortex: 47 nTPM
Single-cell type
- other brain neurons: 17 nCPM
- choroid plexus epithelial cells: 15 nCPM
- rod photoreceptor cells: 12 nCPM
- brain inhibitory neurons: 11 nCPM
- brain excitatory neurons: 10 nCPM
- microglia: 9.9 nCPM
Immune cell
- non-classical monocyte: 213 nTPM
- neutrophil: 132 nTPM
- intermediate monocyte: 122 nTPM
- eosinophil: 121 nTPM
- plasmacytoid DC: 94 nTPM
- myeloid DC: 82 nTPM
Brain region
- choroid plexus: 51 nTPM
- cerebral cortex: 49 nTPM
- hypothalamus: 43 nTPM
- pons: 40 nTPM
- hippocampal formation: 40 nTPM
- medulla oblongata: 39 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about UNC119.
Disease | AllUniProt
Conditions UNC119 is implicated in, by any mechanism.
- Immunodeficiency 13 (IMD13) MIM:615518
- Cone-rod dystrophy 24 (CORD24) MIM:620342
Disease | GeneticClinVar
1 pathogenic / likely-pathogenic of 252 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Macular dystrophy
- Cone-rod dystrophy 24
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.33
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.93
- DepMap mean gene effect
- -0.35
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 6% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- chemical synaptic transmission
- endocytosis
- lipoprotein transport
- mitotic cytokinesis
- negative regulation of caveolin-mediated endocytosis
- negative regulation of clathrin-dependent endocytosis
- nervous system development
- phototransduction
- positive regulation of protein tyrosine kinase activity
- visual perception
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of UNC119 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads UNC119 as an antibody target. Whether an autoantibody or antibody against UNC119 could matter depends on whether native UNC119 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
UNC119 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label UNC119 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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