FADD
FAS-associated death domain protein
Also known as: FADD_HUMAN, GIG3, MORT1
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q13158
- Gene
- FADD
- Ensembl
- ENSG00000168040
- Chromosome
- 11
- Canonical length
- 208 aa
- Protein class
- Cancer-related genes, Disease related genes, Predicted intracellular proteins
- Subcellular location
- Nucleoplasm,Cytosol
OverviewNCBI Gene
The protein encoded by this gene is an adaptor molecule that interacts with various cell surface receptors and mediates cell apoptotic signals. Through its C-terminal death domain, this protein can be recruited by TNFRSF6/Fas-receptor, tumor necrosis factor receptor, TNFRSF25, and TNFSF10/TRAIL-receptor, and thus it participates in the death signaling initiated by these receptors. Interaction of this protein with the receptors unmasks the N-terminal effector domain of this protein, which allows it to recruit caspase-8, and thereby activate the cysteine protease cascade. Knockout studies in mice also suggest the importance of this protein in early T cell development. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
208 residues, UniProt reviewed canonical sequence.
>Q13158|FADD
1 MDPFLVLLHS VSSSLSSSEL TELKFLCLGR VGKRKLERVQ SGLDLFSMLL EQNDLEPGHT
61 ELLRELLASL RRHDLLRRVD DFEAGAAAGA APGEEDLCAA FNVICDNVGK DWRRLARQLK
121 VSDTKIDSIE DRYPRNLTER VRESLRIWKN TEKENATVAH LVGALRSCQM NLVADLVQEV
181 QQARDLQNRS GAMSPMSWNS DASTSEASLocalizationUniProt · AlphaFold · HPA
Whether an antibody against FADD can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.35
- Highest tissue expression
- 19 nTPM
Expression across tissuesHPA
Tissue
- thymus: 19 nTPM
- epididymis: 17 nTPM
- lymph node: 16 nTPM
- tonsil: 16 nTPM
- esophagus: 15 nTPM
- liver: 15 nTPM
Single-cell type
- cytotrophoblasts: 93 nCPM
- migrating cytotrophoblasts: 62 nCPM
- esophageal basal cells: 51 nCPM
- esophageal suprabasal cells: 43 nCPM
- extravillous trophoblasts: 43 nCPM
- hofbauer cells: 31 nCPM
Immune cell
- neutrophil: 89 nTPM
- memory CD8 T-cell: 49 nTPM
- MAIT T-cell: 48 nTPM
- T-reg: 46 nTPM
- non-classical monocyte: 46 nTPM
- naive CD4 T-cell: 45 nTPM
Brain region
- medulla oblongata: 15 nTPM
- pons: 13 nTPM
- thalamus: 13 nTPM
- spinal cord: 13 nTPM
- white matter: 12 nTPM
- midbrain: 12 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about FADD.
Disease | AllUniProt
Conditions FADD is implicated in, by any mechanism.
- Infections, recurrent, associated with encephalopathy, hepatic dysfunction and cardiovascular malformations (IEHDCM) MIM:613759
Disease | GeneticClinVar
2 pathogenic / likely-pathogenic of 155 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- FADD-related immunodeficiency
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.28
- gnomAD pLI
- 0.53
- gnomAD missense Z
- 0.84
- DepMap mean gene effect
- -0.24
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 10% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- apoptotic process
- apoptotic signaling pathway
- behavioral response to cocaine
- cellular response to mechanical stimulus
- death-inducing signaling complex assembly
- defense response to virus
- extrinsic apoptotic signaling pathway
- extrinsic apoptotic signaling pathway in absence of ligand
- extrinsic apoptotic signaling pathway via death domain receptors
- innate immune response
- kidney development
- lymph node development
- motor neuron apoptotic process
- necroptotic signaling pathway
- negative regulation of activation-induced cell death of T cells
- negative regulation of necroptotic process
- positive regulation of activated T cell proliferation
- positive regulation of adaptive immune response
- positive regulation of apoptotic process
- positive regulation of canonical NF-kappaB signal transduction
- positive regulation of execution phase of apoptosis
- positive regulation of extrinsic apoptotic signaling pathway
- positive regulation of innate immune response
- positive regulation of interleukin-8 production
- positive regulation of macrophage differentiation
- positive regulation of proteolysis
- positive regulation of T cell mediated cytotoxicity
- positive regulation of transcription by RNA polymerase II
- positive regulation of tumor necrosis factor production
- positive regulation of type I interferon-mediated signaling pathway
- positive regulation of type II interferon production
- spleen development
- T cell differentiation in thymus
- T cell homeostasis
- thymus development
- TRAIL-activated apoptotic signaling pathway
- positive regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation
Molecular functions
- caspase binding
- death effector domain binding
- death receptor binding
- identical protein binding
- protease binding
- protein-containing complex binding
- protein-macromolecule adaptor activity
- receptor serine/threonine kinase binding
- signaling adaptor activity
- tumor necrosis factor receptor binding
- tumor necrosis factor receptor superfamily binding
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Death domain
- Death effector domain
- Death-like domain superfamily
- Death domain
- Death effector domain
- FAS-associated death domain protein
- FADD, vertebrates
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of FADD in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads FADD as an antibody target. Whether an autoantibody or antibody against FADD could matter depends on whether native FADD is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
FADD is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label FADD as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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