CDC45
Cell division control protein 45 homolog
Also known as: CDC45_HUMAN, CDC45L, CDC45L2
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- O75419
- Gene
- CDC45
- Ensembl
- ENSG00000093009
- Chromosome
- 22
- Canonical length
- 566 aa
- Protein class
- Disease related genes, Human disease related genes, Plasma proteins, Predicted intracellular proteins
- Subcellular location
- Nucleoplasm,Centrosome,Cytosol
OverviewNCBI Gene
The protein encoded by this gene was identified by its strong similarity with Saccharomyces cerevisiae Cdc45, an essential protein required to the initiation of DNA replication. Cdc45 is a member of the highly conserved multiprotein complex including Cdc6/Cdc18, the minichromosome maintenance proteins (MCMs) and DNA polymerase, which is important for early steps of DNA replication in eukaryotes. This protein has been shown to interact with MCM7 and DNA polymerase alpha. Studies of the similar gene in Xenopus suggested that this protein play a pivotal role in the loading of DNA polymerase alpha onto chromatin. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Jul 2013]
Canonical amino-acid sequenceUniProt
566 residues, UniProt reviewed canonical sequence.
>O75419|CDC45
1 MFVSDFRKEF YEVVQSQRVL LFVASDVDAL CACKILQALF QCDHVQYTLV PVSGWQELET
61 AFLEHKEQFH YFILINCGAN VDLLDILQPD EDTIFFVCDT HRPVNVVNVY NDTQIKLLIK
121 QDDDLEVPAY EDIFRDEEED EEHSGNDSDG SEPSEKRTRL EEEIVEQTMR RRQRREWEAR
181 RRDILFDYEQ YEYHGTSSAM VMFELAWMLS KDLNDMLWWA IVGLTDQWVQ DKITQMKYVT
241 DVGVLQRHVS RHNHRNEDEE NTLSVDCTRI SFEYDLRLVL YQHWSLHDSL CNTSYTAARF
301 KLWSVHGQKR LQEFLADMGL PLKQVKQKFQ AMDISLKENL REMIEESANK FGMKDMRVQT
361 FSIHFGFKHK FLASDVVFAT MSLMESPEKD GSGTDHFIQA LDSLSRSNLD KLYHGLELAK
421 KQLRATQQTI ASCLCTNLVI SQGPFLYCSL MEGTPDVMLF SRPASLSLLS KHLLKSFVCS
481 TKNRRCKLLP LVMAAPLSME HGTVTVVGIP PETDSSDRKN FFGRAFEKAA ESTSSRMLHN
541 HFDLSVIELK AEDRSKFLDA LISLLSLocalizationUniProt · AlphaFold · HPA
Whether an antibody against CDC45 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.24
- Highest tissue expression
- 27 nTPM
Expression across tissuesHPA
Tissue
- testis: 27 nTPM
- bone marrow: 24 nTPM
- thymus: 19 nTPM
- tonsil: 11 nTPM
- lymph node: 11 nTPM
- appendix: 5.8 nTPM
Single-cell type
- early spermatids: 132 nCPM
- early primary spermatocytes: 116 nCPM
- late primary spermatocytes: 109 nCPM
- erythrocyte progenitors: 68 nCPM
- differentiating spermatogonia: 57 nCPM
- oocytes: 51 nCPM
Immune cell
- T-reg: 0.9 nTPM
- memory CD8 T-cell: 0.7 nTPM
- total PBMC: 0.6 nTPM
- gdT-cell: 0.5 nTPM
- neutrophil: 0.5 nTPM
- NK-cell: 0.5 nTPM
Brain region
- thalamus: 2.6 nTPM
- amygdala: 1.9 nTPM
- medulla oblongata: 1.6 nTPM
- pons: 1.6 nTPM
- choroid plexus: 1.5 nTPM
- basal ganglia: 1.4 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about CDC45.
Disease | AllUniProt
Conditions CDC45 is implicated in, by any mechanism.
- Meier-Gorlin syndrome 7 (MGORS7) MIM:617063
Disease | GeneticClinVar
24 pathogenic / likely-pathogenic of 392 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Meier-Gorlin syndrome 7
Disease | ImmuneIEDB
Conditions an epitope on CDC45 was assayed in.
- melanoma T cell
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.6
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.83
- DepMap mean gene effect
- -2.14
- DepMap dependency class
- pan
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 6% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- DNA replication
- DNA replication checkpoint signaling
- DNA replication initiation
- double-strand break repair via break-induced replication
- mitotic DNA replication preinitiation complex assembly
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- CDC45
- CDC45
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of CDC45 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads CDC45 as an antibody target. Whether an autoantibody or antibody against CDC45 could matter depends on whether native CDC45 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
CDC45 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label CDC45 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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