USP10
Ubiquitin carboxyl-terminal hydrolase 10
Also known as: KIAA0190, UBP10_HUMAN, UBPO
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q14694
- Gene
- USP10
- Ensembl
- ENSG00000103194
- Chromosome
- 16
- Canonical length
- 798 aa
- Protein class
- Enzymes, Metabolic proteins, Plasma proteins, Predicted intracellular proteins
- Subcellular location
- Nucleoplasm,Cytosol
OverviewNCBI Gene
Ubiquitin is a highly conserved protein that is covalently linked to other proteins to regulate their function and degradation. This gene encodes a member of the ubiquitin-specific protease family of cysteine proteases. The enzyme specifically cleaves ubiquitin from ubiquitin-conjugated protein substrates. The protein is found in the nucleus and cytoplasm. It functions as a co-factor of the DNA-bound androgen receptor complex, and is inhibited by a protein in the Ras-GTPase pathway. The human genome contains several pseudogenes similar to this gene. Several transcript variants, some protein-coding and others not protein-coding, have been found for this gene. [provided by RefSeq, Jan 2013]
Canonical amino-acid sequenceUniProt
798 residues, UniProt reviewed canonical sequence.
>Q14694|USP10
1 MALHSPQYIF GDFSPDEFNQ FFVTPRSSVE LPPYSGTVLC GTQAVDKLPD GQEYQRIEFG
61 VDEVIEPSDT LPRTPSYSIS STLNPQAPEF ILGCTASKIT PDGITKEASY GSIDCQYPGS
121 ALALDGSSNV EAEVLENDGV SGGLGQRERK KKKKRPPGYY SYLKDGGDDS ISTEALVNGH
181 ANSAVPNSVS AEDAEFMGDM PPSVTPRTCN SPQNSTDSVS DIVPDSPFPG ALGSDTRTAG
241 QPEGGPGADF GQSCFPAEAG RDTLSRTAGA QPCVGTDTTE NLGVANGQIL ESSGEGTATN
301 GVELHTTESI DLDPTKPESA SPPADGTGSA SGTLPVSQPK SWASLFHDSK PSSSSPVAYV
361 ETKYSPPAIS PLVSEKQVEV KEGLVPVSED PVAIKIAELL ENVTLIHKPV SLQPRGLINK
421 GNWCYINATL QALVACPPMY HLMKFIPLYS KVQRPCTSTP MIDSFVRLMN EFTNMPVPPK
481 PRQALGDKIV RDIRPGAAFE PTYIYRLLTV NKSSLSEKGR QEDAEEYLGF ILNGLHEEML
541 NLKKLLSPSN EKLTISNGPK NHSVNEEEQE EQGEGSEDEW EQVGPRNKTS VTRQADFVQT
601 PITGIFGGHI RSVVYQQSSK ESATLQPFFT LQLDIQSDKI RTVQDALESL VARESVQGYT
661 TKTKQEVEIS RRVTLEKLPP VLVLHLKRFV YEKTGGCQKL IKNIEYPVDL EISKELLSPG
721 VKNKNFKCHR TYRLFAVVYH HGNSATGGHY TTDVFQIGLN GWLRIDDQTV KVINQYQVVK
781 PTAERTAYLL YYRRVDLLLocalizationUniProt · AlphaFold · HPA
Whether an antibody against USP10 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.49
- Highest tissue expression
- 54 nTPM
Expression across tissuesHPA
Tissue
- skeletal muscle: 54 nTPM
- retina: 49 nTPM
- parathyroid gland: 39 nTPM
- placenta: 38 nTPM
- tongue: 37 nTPM
- tonsil: 35 nTPM
Single-cell type
- neutrophils: 578 nCPM
- cytotrophoblasts: 193 nCPM
- rod photoreceptor cells: 191 nCPM
- neutrophil progenitors: 190 nCPM
- cone photoreceptor cells: 188 nCPM
- ocular epithelial cells: 182 nCPM
Immune cell
- neutrophil: 748 nTPM
- memory CD4 T-cell: 149 nTPM
- total PBMC: 98 nTPM
- myeloid DC: 93 nTPM
- naive CD4 T-cell: 83 nTPM
- classical monocyte: 78 nTPM
Brain region
- cerebellum: 42 nTPM
- white matter: 41 nTPM
- hypothalamus: 39 nTPM
- cerebral cortex: 39 nTPM
- basal ganglia: 38 nTPM
- hippocampal formation: 38 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.28
- gnomAD pLI
- 0.99
- gnomAD missense Z
- -0.67
- DepMap mean gene effect
- -0.66
- DepMap dependency class
- common
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- autophagy
- cellular response to interleukin-1
- DNA damage response
- DNA damage response, signal transduction by p53 class mediator
- DNA repair
- innate immune response
- monoubiquitinated protein deubiquitination
- negative regulation of canonical NF-kappaB signal transduction
- negative regulation of stress granule assembly
- protein deubiquitination
- proteolysis
- regulation of autophagy
- regulation of protein stability
- rescue of stalled ribosome
- translesion synthesis
Molecular functions
- cysteine-type deubiquitinase activity
- cysteine-type endopeptidase activity
- molecular function inhibitor activity
- p53 binding
- RNA binding
- transmembrane transporter binding
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of USP10 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads USP10 as an antibody target. Whether an autoantibody or antibody against USP10 could matter depends on whether native USP10 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
USP10 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label USP10 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
Loading the interactive Seroatlas protein explorer...