TECR
Very-long-chain enoyl-CoA reductase
Also known as: GPSN2, MRT14, SC2, TECR_HUMAN, TER
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9NZ01
- Gene
- TECR
- Ensembl
- ENSG00000099797
- Chromosome
- 19
- Canonical length
- 308 aa
- Protein class
- Disease related genes, Enzymes, Human disease related genes, Metabolic proteins, Potential drug targets, Predicted membrane proteins
- Subcellular location
- Endoplasmic reticulum
OverviewNCBI Gene
This gene encodes a multi-pass membrane protein that resides in the endoplasmic reticulum, and belongs to the steroid 5-alpha reductase family. The elongation of microsomal long and very long chain fatty acid consists of 4 sequential reactions. This protein catalyzes the final step, reducing trans-2,3-enoyl-CoA to saturated acyl-CoA. Alternatively spliced transcript variants have been found for this gene.[provided by RefSeq, Apr 2011]
Canonical amino-acid sequenceUniProt
308 residues, UniProt reviewed canonical sequence.
>Q9NZ01|TECR
1 MKHYEVEILD AKTREKLCFL DKVEPHATIA EIKNLFTKTH PQWYPARQSL RLDPKGKSLK
61 DEDVLQKLPV GTTATLYFRD LGAQISWVTV FLTEYAGPLF IYLLFYFRVP FIYGHKYDFT
121 SSRHTVVHLA CICHSFHYIK RLLETLFVHR FSHGTMPLRN IFKNCTYYWG FAAWMAYYIN
181 HPLYTPPTYG AQQVKLALAI FVICQLGNFS IHMALRDLRP AGSKTRKIPY PTKNPFTWLF
241 LLVSCPNYTY EVGSWIGFAI MTQCLPVALF SLVGFTQMTI WAKGKHRSYL KEFRDYPPLR
301 MPIIPFLLLocalizationUniProt · AlphaFold · HPA
Whether an antibody against TECR can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Other membrane
- Secreted
- No
- Transmembrane segments
- 6
- Mean surface accessibility (rSASA)
- 0.27
- Highest tissue expression
- 352 nTPM
Expression across tissuesHPA
Tissue
- esophagus: 352 nTPM
- skeletal muscle: 343 nTPM
- choroid plexus: 332 nTPM
- parathyroid gland: 288 nTPM
- skin: 249 nTPM
- spinal cord: 212 nTPM
Single-cell type
- late spermatids: 1,462 nCPM
- esophageal apical cells: 1,246 nCPM
- esophageal suprabasal cells: 624 nCPM
- extravillous trophoblasts: 499 nCPM
- late primary spermatocytes: 432 nCPM
- breast lactating cells: 410 nCPM
Immune cell
- T-reg: 291 nTPM
- naive CD4 T-cell: 208 nTPM
- NK-cell: 184 nTPM
- memory CD4 T-cell: 181 nTPM
- total PBMC: 171 nTPM
- naive CD8 T-cell: 165 nTPM
Brain region
- white matter: 224 nTPM
- cerebellum: 212 nTPM
- choroid plexus: 204 nTPM
- pons: 193 nTPM
- medulla oblongata: 190 nTPM
- spinal cord: 185 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about TECR.
Disease | AllUniProt
Conditions TECR is implicated in, by any mechanism.
- Intellectual developmental disorder, autosomal recessive 14 (MRT14) MIM:614020
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.53
- gnomAD pLI
- 0.11
- gnomAD missense Z
- 1.78
- DepMap mean gene effect
- -0.19
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 6% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- fatty acid elongation
- long-chain fatty-acyl-CoA biosynthetic process
- sphingolipid metabolic process
- very long-chain fatty acid biosynthetic process
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of TECR in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads TECR as an antibody target. Whether an autoantibody or antibody against TECR could matter depends on whether native TECR is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
TECR is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label TECR as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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