S100A8
Protein S100-A8
Also known as: 60B8AG, CAGA, CFAG, CGLA, MRP-8, MRP8, P8, S100-A8, S10A8_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P05109
- Gene
- S100A8
- Ensembl
- ENSG00000143546
- Chromosome
- 1
- Canonical length
- 93 aa
- Protein class
- Cancer-related genes, Plasma proteins, Predicted intracellular proteins, Predicted secreted proteins
- Subcellular location
- Intermediate filaments,Cytosol
- Secretome location
- Secreted to blood
- Quaternary structure
- Homodimer
OverviewNCBI Gene
The protein encoded by this gene is a member of the S100 family of proteins containing 2 EF-hand calcium-binding motifs. S100 proteins are localized in the cytoplasm and/or nucleus of a wide range of cells, and involved in the regulation of a number of cellular processes such as cell cycle progression and differentiation. S100 genes include at least 13 members which are located as a cluster on chromosome 1q21. This protein may function in the inhibition of casein kinase and as a cytokine. Altered expression of this protein is associated with the disease cystic fibrosis. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jan 2016]
Canonical amino-acid sequenceUniProt
93 residues, UniProt reviewed canonical sequence.
>P05109|S100A8
1 MLTELEKALN SIIDVYHKYS LIKGNFHAVY RDDLKKLLET ECPQYIRKKG ADVWFKELDI
61 NTDGAVNFQE FLILVIKMGV AAHKKSHEES HKELocalizationUniProt · AlphaFold · HPA
Whether an antibody against S100A8 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.35
- Highest tissue expression
- 36,526 nTPM
Expression across tissuesHPA
Tissue
- esophagus: 36,526 nTPM
- bone marrow: 33,387 nTPM
- vagina: 16,753 nTPM
- cervix: 14,478 nTPM
- tonsil: 8,361 nTPM
- salivary gland: 5,489 nTPM
Single-cell type
- esophageal apical cells: 442,327 nCPM
- esophageal suprabasal cells: 118,515 nCPM
- neutrophils: 52,050 nCPM
- neutrophil progenitors: 51,793 nCPM
- suprabasal keratinocytes: 23,823 nCPM
- monocyte progenitors: 14,611 nCPM
Immune cell
- neutrophil: 53,446 nTPM
- classical monocyte: 26,967 nTPM
- total PBMC: 25,067 nTPM
- myeloid DC: 4,704 nTPM
- eosinophil: 3,037 nTPM
- intermediate monocyte: 2,008 nTPM
Brain region
- cerebral cortex: 66 nTPM
- pons: 23 nTPM
- medulla oblongata: 17 nTPM
- basal ganglia: 14 nTPM
- thalamus: 14 nTPM
- white matter: 13 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about S100A8.
Disease | ImmuneIEDB
Conditions an epitope on S100A8 was assayed in.
- rheumatoid arthritis B cell
- kidney disease B cell
- invasive ductal carcinoma T cell
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.77
- gnomAD pLI
- 0.14
- gnomAD missense Z
- 0.04
- DepMap mean gene effect
- -0.03
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- apoptotic process
- astrocyte development
- autocrine signaling
- autophagy
- chronic inflammatory response
- defense response to bacterium
- defense response to fungus
- endothelial cell migration
- inflammatory response
- innate immune response
- leukocyte migration involved in inflammatory response
- neutrophil aggregation
- neutrophil chemotaxis
- peptide secretion
- peptidyl-cysteine S-nitrosylation
- positive regulation of cell growth
- positive regulation of inflammatory response
- positive regulation of intrinsic apoptotic signaling pathway
- positive regulation of peptide secretion
- regulation of cytoskeleton organization
- regulation of toll-like receptor signaling pathway
- response to ethanol
- response to lipopolysaccharide
- response to zinc ion
Molecular functions
- arachidonate binding
- calcium ion binding
- calcium-dependent protein binding
- microtubule binding
- RAGE receptor binding
- Toll-like receptor 4 binding
- zinc ion binding
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of S100A8 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads S100A8 as an antibody target. Whether an autoantibody or antibody against S100A8 could matter depends on whether native S100A8 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
S100A8 is annotated at the cell surface, where native S100A8 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label S100A8 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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