CCND3
G1/S-specific cyclin-D3
Also known as: CCND3_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P30281
- Gene
- CCND3
- Ensembl
- ENSG00000112576
- Chromosome
- 6
- Canonical length
- 292 aa
- Protein class
- Cancer-related genes, Human disease related genes, Predicted intracellular proteins
- Subcellular location
- Nucleoplasm
OverviewNCBI Gene
The protein encoded by this gene belongs to the highly conserved cyclin family, whose members are characterized by a dramatic periodicity in protein abundance through the cell cycle. Cyclins function as regulators of CDK kinases. Different cyclins exhibit distinct expression and degradation patterns which contribute to the temporal coordination of each mitotic event. This cyclin forms a complex with and functions as a regulatory subunit of CDK4 or CDK6, whose activtiy is required for cell cycle G1/S transition. This protein has been shown to interact with and be involved in the phosphorylation of tumor suppressor protein Rb. The CDK4 activity associated with this cyclin was reported to be necessary for cell cycle progression through G2 phase into mitosis after UV radiation. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2008]
Canonical amino-acid sequenceUniProt
292 residues, UniProt reviewed canonical sequence.
>P30281|CCND3
1 MELLCCEGTR HAPRAGPDPR LLGDQRVLQS LLRLEERYVP RASYFQCVQR EIKPHMRKML
61 AYWMLEVCEE QRCEEEVFPL AMNYLDRYLS CVPTRKAQLQ LLGAVCMLLA SKLRETTPLT
121 IEKLCIYTDH AVSPRQLRDW EVLVLGKLKW DLAAVIAHDF LAFILHRLSL PRDRQALVKK
181 HAQTFLALCA TDYTFAMYPP SMIATGSIGA AVQGLGACSM SGDELTELLA GITGTEVDCL
241 RACQEQIEAA LRESLREASQ TSSSPAPKAP RGSSSQGPSQ TSTPTDVTAI HLLocalizationUniProt · AlphaFold · HPA
Whether an antibody against CCND3 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.34
- Highest tissue expression
- 239 nTPM
Expression across tissuesHPA
Tissue
- thymus: 239 nTPM
- bone marrow: 208 nTPM
- spleen: 165 nTPM
- adrenal gland: 134 nTPM
- lymph node: 134 nTPM
- lung: 99 nTPM
Single-cell type
- neutrophils: 1,913 nCPM
- platelets: 1,550 nCPM
- megakaryocytes: 1,039 nCPM
- nk-cells: 865 nCPM
- b-cells: 852 nCPM
- thymocytes: 790 nCPM
Immune cell
- basophil: 1,285 nTPM
- eosinophil: 726 nTPM
- total PBMC: 635 nTPM
- non-classical monocyte: 408 nTPM
- gdT-cell: 391 nTPM
- myeloid DC: 344 nTPM
Brain region
- hypothalamus: 76 nTPM
- medulla oblongata: 74 nTPM
- thalamus: 70 nTPM
- cerebral cortex: 69 nTPM
- amygdala: 67 nTPM
- pons: 67 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.24
- gnomAD pLI
- 0.98
- gnomAD missense Z
- 1.4
- DepMap mean gene effect
- -0.32
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 6% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cell division
- G1/S transition of mitotic cell cycle
- negative regulation of transcription by RNA polymerase II
- positive regulation of G1/S transition of mitotic cell cycle
- regulation of cell population proliferation
- signal transduction
- T cell proliferation
Molecular functions
- cyclin-dependent protein serine/threonine kinase activator activity
- cyclin-dependent protein serine/threonine kinase activity
- cyclin-dependent protein serine/threonine kinase regulator activity
- protein kinase binding
- protein serine/threonine kinase activator activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of CCND3 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads CCND3 as an antibody target. Whether an autoantibody or antibody against CCND3 could matter depends on whether native CCND3 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
CCND3 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label CCND3 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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