RPL26
Large ribosomal subunit protein uL24
Also known as: L26, RL26_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P61254
- Gene
- RPL26
- Ensembl
- ENSG00000161970
- Chromosome
- 17
- Canonical length
- 145 aa
- Protein class
- Disease related genes, Human disease related genes, Predicted intracellular proteins, Ribosomal proteins
- Subcellular location
- Nucleoli,Endoplasmic reticulum,Cytosol
OverviewNCBI Gene
Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L24P family of ribosomal proteins. It is located in the cytoplasm. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. Mutations in this gene result in Diamond-Blackfan anemia. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2015]
Canonical amino-acid sequenceUniProt
145 residues, UniProt reviewed canonical sequence.
>P61254|RPL26
1 MKFNPFVTSD RSKNRKRHFN APSHIRRKIM SSPLSKELRQ KYNVRSMPIR KDDEVQVVRG
61 HYKGQQIGKV VQVYRKKYVI YIERVQREKA NGTTVHVGIH PSKVVITRLK LDKDRKKILE
121 RKAKSRQVGK EKGKYKEETI EKMQELocalizationUniProt · AlphaFold · HPA
Whether an antibody against RPL26 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.37
- Highest tissue expression
- 4,596 nTPM
Expression across tissuesHPA
Tissue
- ovary: 4,596 nTPM
- breast: 3,923 nTPM
- bone marrow: 3,639 nTPM
- pancreas: 3,449 nTPM
- skin: 2,978 nTPM
- lymph node: 2,846 nTPM
Single-cell type
- enteric stem cells: 6,397 nCPM
- epididymal efferent duct absorptive cells: 6,124 nCPM
- decidual stromal cells: 5,734 nCPM
- gastric chief cells: 5,339 nCPM
- enteric transient amplifying cells: 5,326 nCPM
- extravillous trophoblasts: 5,312 nCPM
Immune cell
- total PBMC: 3,243 nTPM
- memory B-cell: 2,420 nTPM
- naive CD4 T-cell: 2,278 nTPM
- naive B-cell: 2,163 nTPM
- naive CD8 T-cell: 2,016 nTPM
- memory CD4 T-cell: 1,968 nTPM
Brain region
- white matter: 663 nTPM
- spinal cord: 648 nTPM
- hypothalamus: 604 nTPM
- medulla oblongata: 595 nTPM
- basal ganglia: 556 nTPM
- thalamus: 541 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about RPL26.
Disease | AllUniProt
Conditions RPL26 is implicated in, by any mechanism.
- Diamond-Blackfan anemia 11 (DBA11) MIM:614900
Disease | GeneticClinVar
6 pathogenic / likely-pathogenic of 101 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Diamond-Blackfan anemia 11
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.38
- gnomAD pLI
- 0.92
- gnomAD missense Z
- 1.64
- DepMap mean gene effect
- -1.94
- DepMap dependency class
- pan
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cellular response to gamma radiation
- cellular response to UV
- cytoplasmic translation
- DNA damage response, signal transduction by p53 class mediator
- positive regulation of DNA damage response, signal transduction by p53 class mediator
- positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
- positive regulation of translation
- ribosomal large subunit biogenesis
- rRNA processing
- translation
- regulation of translation involved in cellular response to UV
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Large ribosomal subunit protein uL24, eukaryota_archaea
- KOW
- Large ribosomal subunit protein uL24, conserved site
- Translation protein SH3-like domain superfamily
- Large ribosomal subunit protein uL2, domain 2
- Large ribosomal subunit protein uL24, KOW domain
- KOW motif
- Ribosomal proteins L26 eukaryotic, L24P archaeal
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of RPL26 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads RPL26 as an antibody target. Whether an autoantibody or antibody against RPL26 could matter depends on whether native RPL26 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
RPL26 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label RPL26 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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