RPS26
Small ribosomal subunit protein eS26
Also known as: eS26, RS26_HUMAN, S26
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P62854
- Gene
- RPS26
- Ensembl
- ENSG00000197728
- Chromosome
- 12
- Canonical length
- 115 aa
- Protein class
- Disease related genes, Human disease related genes, Predicted intracellular proteins, Ribosomal proteins
- Subcellular location
- Nucleoli,Endoplasmic reticulum,Cytosol
OverviewNCBI Gene
This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S26E family of ribosomal proteins. Mutations in this gene are found in Diamond-Blackfan anemia 10. There are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Aug 2017]
Canonical amino-acid sequenceUniProt
115 residues, UniProt reviewed canonical sequence.
>P62854|RPS26
1 MTKKRRNNGR AKKGRGHVQP IRCTNCARCV PKDKAIKKFV IRNIVEAAAV RDISEASVFD
61 AYVLPKLYVK LHYCVSCAIH SKVVRNRSRE ARKDRTPPPR FRPAGAAPRP PPKPMLocalizationUniProt · AlphaFold · HPA
Whether an antibody against RPS26 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.5
- Highest tissue expression
- 1,250 nTPM
Expression across tissuesHPA
Tissue
- adrenal gland: 1,250 nTPM
- pancreas: 1,113 nTPM
- ovary: 1,093 nTPM
- liver: 885 nTPM
- esophagus: 848 nTPM
- skin: 824 nTPM
Single-cell type
- gastric progenitor cells: 3,108 nCPM
- epididymal efferent duct absorptive cells: 2,795 nCPM
- extravillous trophoblasts: 2,740 nCPM
- esophageal suprabasal cells: 2,577 nCPM
- esophageal apical cells: 2,535 nCPM
- ovarian stromal cells: 2,236 nCPM
Immune cell
- total PBMC: 1,255 nTPM
- T-reg: 965 nTPM
- naive CD4 T-cell: 900 nTPM
- memory B-cell: 874 nTPM
- naive CD8 T-cell: 866 nTPM
- memory CD4 T-cell: 843 nTPM
Brain region
- hypothalamus: 136 nTPM
- cerebral cortex: 111 nTPM
- midbrain: 105 nTPM
- medulla oblongata: 96 nTPM
- thalamus: 92 nTPM
- pons: 92 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about RPS26.
Disease | AllUniProt
Conditions RPS26 is implicated in, by any mechanism.
- Diamond-Blackfan anemia 10 (DBA10) MIM:613309
Disease | GeneticClinVar
34 pathogenic / likely-pathogenic of 188 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.48
- gnomAD pLI
- 0.85
- gnomAD missense Z
- 1.93
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of RPS26 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads RPS26 as an antibody target. Whether an autoantibody or antibody against RPS26 could matter depends on whether native RPS26 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
RPS26 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label RPS26 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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