ODAD1
Outer dynein arm-docking complex subunit 1
Also known as: CCDC114, CILD20, FLJ32926, ODAD1_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q96M63
- Gene
- ODAD1
- Ensembl
- ENSG00000105479
- Chromosome
- 19
- Canonical length
- 670 aa
- Protein class
- Disease related genes, Human disease related genes, Predicted intracellular proteins
OverviewNCBI Gene
This gene encodes a coiled-coil domain-containing protein that is a component of the outer dynein arm docking complex in cilia cells. Mutations in this gene may cause primary ciliary dyskinesia 20. [provided by RefSeq, May 2013]
Canonical amino-acid sequenceUniProt
670 residues, UniProt reviewed canonical sequence.
>Q96M63|ODAD1
1 MEGERRAYSK EVHQRINKQL EEIRRLEEVR GDLQVQISAA QNQVKRLRDS QRLENMDRLL
61 KGRAQVQAEI EELQEQTRAL DKQIQEWETR IFTHSKNVRS PGFILDQKVK IRRRIRILEN
121 QLDRVTCHFD NQLVRNAALR EELDLLRIDR NRYLNVDRKL KKEIHHLHHL VSTLILSSTS
181 AYAVREEAKA KMGLLRERAE KEEAQSEMEA QVLQRQILHL EQLHHFLKLK NNDRQPDPDV
241 LEKREKQAGE VAEGVWKTSQ ERLVLCYEDA LNKLSQLMGE SDPDLLVQKY LEIEERNFAE
301 FNFINEQNLE LEHVQEEIKE MQEALVSARA SKDDQHLLQE QQQKVLQQRM DKVHSEAERL
361 EARFQDVRGQ LEKLKADIQL LFTKAHCDSS MIDDLLGVKT SMGDRDMGLF LSLIEKRLVE
421 LLTVQAFLHA QSFTSLADAA LLVLGQSLED LPKKMAPLQP PDTLEDPPGF EASDDYPMSR
481 EELLSQVEKL VELQEQAEAQ RQKDLAAAAA KLDGTLSVDL ASTQRAGSST VLVPTRHPHA
541 IPGSILSHKT SRDRGSLGHV TFGGLSSSTG HLPSHITHGD PNTGHVTFGS TSASSGGHVT
601 FRPVSASSYL GSTGYVGSSR GGENTEGGVE SGGTASDSSG GLGSSRDHVS STGPASSTGP
661 GSSTSKDSRGLocalizationUniProt · AlphaFold · HPA
Whether an antibody against ODAD1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.54
- Highest tissue expression
- 28 nTPM
Expression across tissuesHPA
Tissue
- choroid plexus: 28 nTPM
- fallopian tube: 24 nTPM
- testis: 21 nTPM
- hypothalamus: 5.8 nTPM
- lung: 5.7 nTPM
- hippocampal formation: 5.1 nTPM
Single-cell type
- ependymal cells: 163 nCPM
- respiratory ciliated cells: 152 nCPM
- fallopian tube ciliated cells: 125 nCPM
- choroid plexus epithelial cells: 115 nCPM
- endometrial ciliated cells: 96 nCPM
- epididymal efferent duct ciliated cells: 45 nCPM
Immune cell
- neutrophil: 0.1 nTPM
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
Brain region
- choroid plexus: 62 nTPM
- midbrain: 26 nTPM
- medulla oblongata: 18 nTPM
- spinal cord: 10 nTPM
- pons: 9.8 nTPM
- hippocampal formation: 5 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about ODAD1.
Disease | AllUniProt
Conditions ODAD1 is implicated in, by any mechanism.
- Ciliary dyskinesia, primary, 20 (CILD20) MIM:615067
Disease | GeneticClinVar
30 pathogenic / likely-pathogenic of 596 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Primary ciliary dyskinesia
- Primary ciliary dyskinesia 20
- ODAD1-related disorder
- Adams-Oliver syndrome 5
- Kartagener syndrome
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.96
- gnomAD pLI
- 0
- DepMap mean gene effect
- -0.16
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of ODAD1 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads ODAD1 as an antibody target. Whether an autoantibody or antibody against ODAD1 could matter depends on whether native ODAD1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
ODAD1 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label ODAD1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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