FZD5
Frizzled-5
Also known as: C2orf31, DKFZP434E2135, FZD5_HUMAN, HFZ5
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q13467
- Gene
- FZD5
- Ensembl
- ENSG00000163251
- Chromosome
- 2
- Canonical length
- 585 aa
- Protein class
- G-protein coupled receptors, Predicted membrane proteins
- Quaternary structure
- Homodimer
OverviewNCBI Gene
Members of the 'frizzled' gene family encode 7-transmembrane domain proteins that are receptors for Wnt signaling proteins. The FZD5 protein is believed to be the receptor for the Wnt5A ligand. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
585 residues, UniProt reviewed canonical sequence.
>Q13467|FZD5
1 MARPDPSAPP SLLLLLLAQL VGRAAAASKA PVCQEITVPM CRGIGYNLTH MPNQFNHDTQ
61 DEAGLEVHQF WPLVEIQCSP DLRFFLCSMY TPICLPDYHK PLPPCRSVCE RAKAGCSPLM
121 RQYGFAWPER MSCDRLPVLG RDAEVLCMDY NRSEATTAPP RPFPAKPTLP GPPGAPASGG
181 ECPAGGPFVC KCREPFVPIL KESHPLYNKV RTGQVPNCAV PCYQPSFSAD ERTFATFWIG
241 LWSVLCFIST STTVATFLID MERFRYPERP IIFLSACYLC VSLGFLVRLV VGHASVACSR
301 EHNHIHYETT GPALCTIVFL LVYFFGMASS IWWVILSLTW FLAAGMKWGN EAIAGYAQYF
361 HLAAWLIPSV KSITALALSS VDGDPVAGIC YVGNQNLNSL RGFVLGPLVL YLLVGTLFLL
421 AGFVSLFRIR SVIKQGGTKT DKLEKLMIRI GIFTLLYTVP ASIVVACYLY EQHYRESWEA
481 ALTCACPGHD TGQPRAKPEY WVLMLKYFMC LVVGITSGVW IWSGKTVESW RRFTSRCCCR
541 PRRGHKSGGA MAAGDYPEAS AALTGRTGPP GPAATYHKQV SLSHVLocalizationUniProt · AlphaFold · HPA
Whether an antibody against FZD5 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 7
- Mean surface accessibility (rSASA)
- 0.36
- Highest tissue expression
- 21 nTPM
Expression across tissuesHPA
Tissue
- liver: 21 nTPM
- duodenum: 18 nTPM
- colon: 17 nTPM
- small intestine: 14 nTPM
- rectum: 14 nTPM
- stomach: 11 nTPM
Single-cell type
- alveolar cells type 1: 100 nCPM
- colonocytes: 97 nCPM
- alveolar cells type 2: 67 nCPM
- hepatocytes: 65 nCPM
- foveolar cells: 62 nCPM
- müller glia: 57 nCPM
Immune cell
- classical monocyte: 0.1 nTPM
- myeloid DC: 0.1 nTPM
- basophil: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
Brain region
- white matter: 14 nTPM
- midbrain: 12 nTPM
- cerebral cortex: 9.8 nTPM
- hypothalamus: 8.8 nTPM
- choroid plexus: 8.6 nTPM
- basal ganglia: 8.4 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about FZD5.
Disease | AllUniProt
Conditions FZD5 is implicated in, by any mechanism.
- Microphthalmia/Coloboma 11 (MCOPCB11) MIM:620731
Disease | GeneticClinVar
10 pathogenic / likely-pathogenic of 140 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Microphthalmia/coloboma 11
- Congenital ocular coloboma
- Autosomal dominant FZD5-related disorders
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.28
- gnomAD pLI
- 0.98
- gnomAD missense Z
- 3
- DepMap mean gene effect
- -0.05
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- angiogenesis
- anterior/posterior axis specification, embryo
- apoptotic process involved in morphogenesis
- branching involved in labyrinthine layer morphogenesis
- canonical Wnt signaling pathway
- cellular response to molecule of bacterial origin
- chorionic trophoblast cell differentiation
- embryonic axis specification
- embryonic camera-type eye morphogenesis
- eye development
- glandular epithelial cell maturation
- intestinal epithelial cell maturation
- labyrinthine layer blood vessel development
- negative regulation of cell population proliferation
- neuron differentiation
- non-canonical Wnt signaling pathway
- positive regulation of interleukin-1 beta production
- positive regulation of protein targeting to mitochondrion
- positive regulation of T cell cytokine production
- positive regulation of transcription by RNA polymerase II
- positive regulation of tumor necrosis factor production
- positive regulation of type II interferon production
- post-embryonic camera-type eye development
- regulation of bicellular tight junction assembly
- regulation of chorionic trophoblast cell proliferation
- regulation of mitophagy
- Spemann organizer formation
- synapse assembly
- syncytiotrophoblast cell differentiation involved in labyrinthine layer development
- T cell differentiation in thymus
Molecular functions
- amyloid-beta binding
- G protein-coupled receptor activity
- lipid binding
- protein kinase binding
- protein-containing complex binding
- ubiquitin protein ligase binding
- Wnt receptor activity
- Wnt-protein binding
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of FZD5 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads FZD5 as an antibody target. Whether an autoantibody or antibody against FZD5 could matter depends on whether native FZD5 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
FZD5 is annotated at the cell surface, where native FZD5 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label FZD5 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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