BRD8
Bromodomain-containing protein 8
Also known as: BRD8_HUMAN, p120, SMAP
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9H0E9
- Gene
- BRD8
- Ensembl
- ENSG00000112983
- Chromosome
- 5
- Canonical length
- 1235 aa
- Protein class
- Predicted intracellular proteins
- Subcellular location
- Nucleoplasm,Mitochondria
OverviewNCBI Gene
The protein encoded by this gene interacts with thyroid hormone receptor in a ligand-dependent manner and enhances thyroid hormone-dependent activation from thyroid response elements. This protein contains a bromodomain and is thought to be a nuclear receptor coactivator. Multiple alternatively spliced transcript variants that encode distinct isoforms have been identified. [provided by RefSeq, Jul 2014]
Canonical amino-acid sequenceUniProt
1235 residues, UniProt reviewed canonical sequence.
>Q9H0E9|BRD8
1 MATGTGKHKL LSTGPTEPWS IREKLCLASS VMRSGDQNWV SVSRAIKPFA EPGRPPDWFS
61 QKHCASQYSE LLETTETPKR KRGEKGEVVE TVEDVIVRKL TAERVEELKK VIKETQERYR
121 RLKRDAELIQ AGHMDSRLDE LCNDIATKKK LEEEEAEVKR KATDAAYQAR QAVKTPPRRL
181 PTVMVRSPID SASPGGDYPL GDLTPTTMEE ATSGVNESEM AVASGHLNST GVLLEVGGVL
241 PMIHGGEIQQ TPNTVAASPA ASGAPTLSRL LEAGPTQFTT PLASFTTVAS EPPVKLVPPP
301 VESVSQATIV MMPALPAPSS APAVSTTESV APVSQPDNCV PMEAVGDPHT VTVSMDSSEI
361 SMIINSIKEE CFRSGVAEAP VGSKAPSIDG KEELDLAEKM DIAVSYTGEE LDFETVGDII
421 AIIEDKVDDH PEVLDVAAVE AALSFCEEND DPQSLPGPWE HPIQQERDKP VPLPAPEMTV
481 KQERLDFEET ENKGIHELVD IREPSAEIKV EPAEPEPVIS GAEIVAGVVP ATSMEPPELR
541 SQDLDEELGS TAAGEIVEAD VAIGKGDETP LTNVKTEASP ESMLSPSHGS NPIEDPLEAE
601 TQHKFEMSDS LKEESGTIFG SQIKDAPGED EEEDGVSEAA SLEEPKEEDQ GEGYLSEMDN
661 EPPVSESDDG FSIHNATLQS HTLADSIPSS PASSQFSVCS EDQEAIQAQK IWKKAIMLVW
721 RAAANHRYAN VFLQPVTDDI APGYHSIVQR PMDLSTIKKN IENGLIRSTA EFQRDIMLMF
781 QNAVMYNSSD HDVYHMAVEM QRDVLEQIQQ FLATQLIMQT SESGISAKSL RGRDSTRKQD
841 ASEKDSVPMG SPAFLLSLFM GHEWVWLDSE QDHPNDSELS NDCRSLFSSW DSSLDLDVGN
901 WRETEDPEAE ELEESSPERE PSELLVGDGG SEESQEAARK ASHQNLLHFL SEVAYLMEPL
961 CISSNESSEG CCPPSGTRQE GREIKASEGE RELCRETEEL SAKGDPLVAE KPLGENGKPE
1021 VASAPSVICT VQGLLTESEE GEAQQESKGE DQGEVYVSEM EDQPPSGECD DAFNIKETPL
1081 VDTLFSHATS SKLTDLSQDD PVQDHLLFKK TLLPVWKMIA SHRFSSPFLK PVSERQAPGY
1141 KDVVKRPMDL TSLKRNLSKG RIRTMAQFLR DLMLMFQNAV MYNDSDHHVY HMAVEMRQEV
1201 LEQIQVLNIW LDKRKGSSSL EGEPANPVDD GKPVFLocalizationUniProt · AlphaFold · HPA
Whether an antibody against BRD8 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.58
- Highest tissue expression
- 78 nTPM
Expression across tissuesHPA
Tissue
- testis: 78 nTPM
- pituitary gland: 45 nTPM
- epididymis: 39 nTPM
- cerebellum: 37 nTPM
- retina: 36 nTPM
- thymus: 35 nTPM
Single-cell type
- late primary spermatocytes: 315 nCPM
- early primary spermatocytes: 221 nCPM
- early spermatids: 82 nCPM
- lactotrophs: 72 nCPM
- tuft cells: 69 nCPM
- somatotrophs: 68 nCPM
Immune cell
- NK-cell: 24 nTPM
- neutrophil: 20 nTPM
- basophil: 16 nTPM
- naive CD8 T-cell: 16 nTPM
- naive CD4 T-cell: 16 nTPM
- MAIT T-cell: 16 nTPM
Brain region
- white matter: 56 nTPM
- cerebellum: 54 nTPM
- cerebral cortex: 49 nTPM
- basal ganglia: 46 nTPM
- hypothalamus: 46 nTPM
- thalamus: 44 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.52
- gnomAD pLI
- 0
- gnomAD missense Z
- 3.03
- DepMap mean gene effect
- -0.53
- DepMap dependency class
- common
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cell surface receptor signaling pathway
- cellular response to thyroid hormone stimulus
- chromatin organization
- positive regulation of DNA-templated transcription
- positive regulation of double-strand break repair via homologous recombination
- positive regulation of transcription by RNA polymerase II
- regulation of apoptotic process
- regulation of cell cycle
- regulation of double-strand break repair
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Bromodomain
- Bromodomain-like superfamily
- Bromodomain
- Brd8, Bromo domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of BRD8 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads BRD8 as an antibody target. Whether an autoantibody or antibody against BRD8 could matter depends on whether native BRD8 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
BRD8 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label BRD8 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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