BCL10
B-cell lymphoma/leukemia 10
Also known as: BCL10_HUMAN, c-E10, CARMEN, CIPER, CLAP, mE10
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- O95999
- Gene
- BCL10
- Ensembl
- ENSG00000142867
- Chromosome
- 1
- Canonical length
- 233 aa
- Protein class
- Cancer-related genes, Disease related genes, Human disease related genes, Predicted intracellular proteins
- Subcellular location
- Nucleoplasm,Cytosol
- Quaternary structure
- Homomultimer
OverviewNCBI Gene
This gene was identified by its translocation in a case of mucosa-associated lymphoid tissue (MALT) lymphoma. The protein encoded by this gene contains a caspase recruitment domain (CARD), and has been shown to induce apoptosis and to activate NF-kappaB. This protein is reported to interact with other CARD domain containing proteins including CARD9, 10, 11 and 14, which are thought to function as upstream regulators in NF-kappaB signaling. This protein is found to form a complex with MALT1, a protein encoded by another gene known to be translocated in MALT lymphoma. MALT1 and this protein are thought to synergize in the activation of NF-kappaB, and the deregulation of either of them may contribute to the same pathogenetic process that leads to the malignancy. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2016]
Canonical amino-acid sequenceUniProt
233 residues, UniProt reviewed canonical sequence.
>O95999|BCL10
1 MEPTAPSLTE EDLTEVKKDA LENLRVYLCE KIIAERHFDH LRAKKILSRE DTEEISCRTS
61 SRKRAGKLLD YLQENPKGLD TLVESIRREK TQNFLIQKIT DEVLKLRNIK LEHLKGLKCS
121 SCEPFPDGAT NNLSRSNSDE SNFSEKLRAS TVMYHPEGES STTPFFSTNS SLNLPVLEVG
181 RTENTIFSST TLPRPGDPGA PPLPPDLQLE EEGTCANSSE MFLPLRSRTV SRQLocalizationUniProt · AlphaFold · HPA
Whether an antibody against BCL10 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.53
- Highest tissue expression
- 26 nTPM
Expression across tissuesHPA
Tissue
- colon: 26 nTPM
- rectum: 23 nTPM
- urinary bladder: 22 nTPM
- bone marrow: 21 nTPM
- gallbladder: 19 nTPM
- esophagus: 19 nTPM
Single-cell type
- esophageal apical cells: 406 nCPM
- ocular epithelial cells: 249 nCPM
- urothelial cells: 224 nCPM
- fallopian secretory cells: 216 nCPM
- endometrial secretory cells: 214 nCPM
- basal keratinocytes: 214 nCPM
Immune cell
- neutrophil: 66 nTPM
- basophil: 59 nTPM
- memory B-cell: 39 nTPM
- eosinophil: 37 nTPM
- intermediate monocyte: 35 nTPM
- naive B-cell: 34 nTPM
Brain region
- cerebral cortex: 12 nTPM
- choroid plexus: 11 nTPM
- thalamus: 11 nTPM
- cerebellum: 9.6 nTPM
- white matter: 9.5 nTPM
- hippocampal formation: 9.2 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about BCL10.
Disease | AllUniProt
Conditions BCL10 is implicated in, by any mechanism.
- Immunodeficiency 37 (IMD37) MIM:616098
- Lymphoma, mucosa-associated lymphoid type (MALTOMA) MIM:137245
Disease | GeneticClinVar
20 pathogenic / likely-pathogenic of 143 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Follicular lymphoma
- Immunodeficiency 37
- Mucosa-associated lymphoma
- MALE GERM CELL TUMOR, SOMATIC
- Mesothelioma
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.73
- gnomAD pLI
- 0.34
- gnomAD missense Z
- 1.39
- DepMap mean gene effect
- -0.15
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- adaptive immune response
- antifungal innate immune response
- apoptotic signaling pathway
- B cell apoptotic process
- cellular defense response
- cellular response to lipopolysaccharide
- cellular response to mechanical stimulus
- immunoglobulin mediated immune response
- innate immune response
- lipopolysaccharide-mediated signaling pathway
- negative regulation of mature B cell apoptotic process
- neural tube closure
- non-canonical NF-kappaB signal transduction
- positive regulation of apoptotic process
- positive regulation of canonical NF-kappaB signal transduction
- positive regulation of DNA-templated transcription
- positive regulation of extrinsic apoptotic signaling pathway
- positive regulation of interleukin-6 production
- positive regulation of interleukin-8 production
- positive regulation of lymphotoxin A production
- positive regulation of mast cell cytokine production
- positive regulation of NF-kappaB transcription factor activity
- positive regulation of phosphorylation
- positive regulation of protein ubiquitination
- positive regulation of T cell activation
- positive regulation of T cell receptor signaling pathway
- programmed cell death
- protein homooligomerization
- quinolinate biosynthetic process
- response to food
- T cell apoptotic process
- T cell receptor signaling pathway
- toll-like receptor signaling pathway
Molecular functions
- CARD domain binding
- general transcription initiation factor binding
- identical protein binding
- NF-kappaB binding
- protease binding
- protein kinase B binding
- protein-containing complex binding
- protein-macromolecule adaptor activity
- signaling adaptor activity
- transcription coactivator activity
- ubiquitin protein ligase binding
Cellular components
Protein domainsUniProt · Pfam · InterPro
- CARD domain
- Death-like domain superfamily
- Caspase recruitment domain
- B-cell lymphoma/leukemia 10/E10
- BCL10, CARD domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of BCL10 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads BCL10 as an antibody target. Whether an autoantibody or antibody against BCL10 could matter depends on whether native BCL10 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
BCL10 is annotated at the cell surface, where native BCL10 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label BCL10 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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