CARD10
Caspase recruitment domain-containing protein 10
Also known as: BIMP1, CAR10_HUMAN, CARMA3
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9BWT7
- Gene
- CARD10
- Ensembl
- ENSG00000100065
- Chromosome
- 22
- Canonical length
- 1032 aa
- Protein class
- Disease related genes, Plasma proteins, Predicted intracellular proteins
- Subcellular location
- Cytosol
OverviewNCBI Gene
The caspase recruitment domain (CARD) is a protein module that consists of 6 or 7 antiparallel alpha helices. It participates in apoptosis signaling through highly specific protein-protein homophilic interactions. Like several other CARD proteins, CARD10 belongs to the membrane-associated guanylate kinase (MAGUK) family and activates NF-kappa-B (NFKB; see MIM 164011) through BCL10 (MIM 603517) (Wang et al., 2001 [PubMed 11259443]).[supplied by OMIM, Mar 2008]
Canonical amino-acid sequenceUniProt
1032 residues, UniProt reviewed canonical sequence.
>Q9BWT7|CARD10
1 MPGRAEAGEA EEEAGAGSGS EAEEDALWER IEGVRHRLAR ALNPAKLTPY LRQCRVIDEQ
61 DEEEVLSTYR FPCRVNRTGR LMDILRCRGK RGYEAFLEAL EFYYPEHFTL LTGQEPAQRC
121 SMILDEEGPE GLTQFLMTEV RRLREARKSQ LQREQQLQAR GRVLEEERAG LEQRLRDQQQ
181 AQERCQRLRE DWEAGSLELL RLKDENYMIA MRLAQLSEEK NSAVLRSRDL QLAVDQLKLK
241 VSRLEEECAL LRRARGPPPG AEEKEKEKEK EKEPDNVDLV SELRAENQRL TASLRELQEG
301 LQQEASRPGA PGSERILLDI LEHDWREAQD SRQELCQKLH AVQGELQWAE ELRDQYLQEM
361 EDLRLKHRTL QKDCDLYKHR MATVLAQLEE IEKERDQAIQ SRDRIQLQYS QSLIEKDQYR
421 KQVRGLEAER DELLTTLTSL EGTKALLEVQ LQRAQGGTCL KACASSHSLC SNLSSTWSLS
481 EFPSPLGGPE ATGEAAVMGG PEPHNSEEAT DSEKEINRLS ILPFPPSAGS ILRRQREEDP
541 APPKRSFSSM SDITGSVTLK PWSPGLSSSS SSDSVWPLGK PEGLLARGCG LDFLNRSLAI
601 RVSGRSPPGG PEPQDKGPDG LSFYGDRWSG AVVRRVLSGP GSARMEPREQ RVEAAGLEGA
661 CLEAEAQQRT LLWNQGSTLP SLMDSKACQS FHEALEAWAK GPGAEPFYIR ANLTLPERAD
721 PHALCVKAQE ILRLVDSAYK RRQEWFCTRV DPLTLRDLDR GTVPNYQRAQ QLLEVQEKCL
781 PSSRHRGPRS NLKKRALDQL RLVRPKPVGA PAGDSPDQLL LEPCAEPERS LRPYSLVRPL
841 LVSALRPVVL LPECLAPRLI RNLLDLPSSR LDFQVCPAES LSGEELCPSS APGAPKAQPA
901 TPGLGSRIRA IQESVGKKHC LLELGARGVR ELVQNEIYPI VIHVEVTEKN VREVRGLLGR
961 PGWRDSELLR QCRGSEQVLW GLPCSWVQVP AHEWGHAEEL AKVVRGRILQ EQARLVWVEC
1021 GSSRGCPSSS EALocalizationUniProt · AlphaFold · HPA
Whether an antibody against CARD10 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.49
- Highest tissue expression
- 34 nTPM
Expression across tissuesHPA
Tissue
- small intestine: 34 nTPM
- duodenum: 32 nTPM
- salivary gland: 18 nTPM
- testis: 15 nTPM
- kidney: 14 nTPM
- colon: 12 nTPM
Single-cell type
- lymphatic endothelial cells: 49 nCPM
- sertoli cells: 45 nCPM
- enterocytes: 42 nCPM
- goblet cells: 35 nCPM
- tuft cells: 35 nCPM
- pancreatic duct cells: 30 nCPM
Immune cell
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
- MAIT T-cell: 0 nTPM
Brain region
- pons: 8.2 nTPM
- thalamus: 6.5 nTPM
- medulla oblongata: 6.2 nTPM
- amygdala: 5.2 nTPM
- basal ganglia: 4.5 nTPM
- spinal cord: 4.5 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about CARD10.
Disease | AllUniProt
Conditions CARD10 is implicated in, by any mechanism.
- Immunodeficiency 89 and autoimmunity (IMD89) MIM:619632
Disease | GeneticClinVar
1 pathogenic / likely-pathogenic of 214 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Immunodeficiency 89 and autoimmunity
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.45
- gnomAD pLI
- 0
- gnomAD missense Z
- 2.2
- DepMap mean gene effect
- -0.1
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- activation of NF-kappaB-inducing kinase activity
- negative regulation of cell migration involved in sprouting angiogenesis
- positive regulation of canonical NF-kappaB signal transduction
- positive regulation of protein localization to nucleus
- protein-containing complex assembly
- regulation of apoptotic process
- regulation of immune response
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of CARD10 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads CARD10 as an antibody target. Whether an autoantibody or antibody against CARD10 could matter depends on whether native CARD10 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
CARD10 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label CARD10 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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