AKAP1
A-kinase anchor protein 1, mitochondrial
Also known as: AKAP1_HUMAN, AKAP121, AKAP149, AKAP84, D-AKAP1, PPP1R43, PRKA1, S-AKAP84, SAKAP84, TDRD17
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q92667
- Gene
- AKAP1
- Ensembl
- ENSG00000121057
- Chromosome
- 17
- Canonical length
- 903 aa
- Protein class
- Predicted intracellular proteins, Predicted membrane proteins
- Subcellular location
- Mitochondria
OverviewNCBI Gene
The A-kinase anchor proteins (AKAPs) are a group of structurally diverse proteins, which have the common function of binding to the regulatory subunit of protein kinase A (PKA) and confining the holoenzyme to discrete locations within the cell. This gene encodes a member of the AKAP family. The encoded protein binds to type I and type II regulatory subunits of PKA and anchors them to the mitochondrion. This protein is speculated to be involved in the cAMP-dependent signal transduction pathway and in directing RNA to a specific cellular compartment. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
903 residues, UniProt reviewed canonical sequence.
>Q92667|AKAP1
1 MAIQFRSLFP LALPGMLALL GWWWFFSRKK GHVSSHDEQQ VEAGAVQLRA DPAIKEPLPV
61 EDVCPKVVST PPSVTEPPEK ELSTVSKLPA EPPALLQTHP PCRRSESSGI LPNTTDMRLR
121 PGTRRDDSTK LELALTGGEA KSIPLECPLS SPKGVLFSSK SAEVCKQDSP FSRVPRKVQP
181 GYPVVPAEKR SSGERARETG GAEGTGDAVL GEKVLEEALL SREHVLELEN SKGPSLASLE
241 GEEDKGKSSS SQVVGPVQEE EYVAEKLPSR FIESAHTELA KDDAAPAPPV ADAKAQDRGV
301 EGELGNEESL DRNEEGLDRN EEGLDRNEES LDRNEEGLDR NEEIKRAAFQ IISQVISEAT
361 EQVLATTVGK VAGRVCQASQ LQGQKEESCV PVHQKTVLGP DTAEPATAEA AVAPPDAGLP
421 LPGLPAEGSP PPKTYVSCLK SLLSSPTKDS KPNISAHHIS LASCLALTTP SEELPDRAGI
481 LVEDATCVTC MSDSSQSVPL VASPGHCSDS FSTSGLEDSC TETSSSPRDK AITPPLPEST
541 VPFSNGVLKG ELSDLGAEDG WTMDAEADHS GGSDRNSMDS VDSCCSLKKT ESFQNAQAGS
601 NPKKVDLIIW EIEVPKHLVG RLIGKQGRYV SFLKQTSGAK IYISTLPYTQ SVQICHIEGS
661 QHHVDKALNL IGKKFKELNL TNIYAPPLPS LALPSLPMTS WLMLPDGITV EVIVVNQVNA
721 GHLFVQQHTH PTFHALRSLD QQMYLCYSQP GIPTLPTPVE ITVICAAPGA DGAWWRAQVV
781 ASYEETNEVE IRYVDYGGYK RVKVDVLRQI RSDFVTLPFQ GAEVLLDSVM PLSDDDQFSP
841 EADAAMSEMT GNTALLAQVT SYSPTGLPLI QLWSVVGDEV VLINRSLVER GLAQWVDSYY
901 TSLLocalizationUniProt · AlphaFold · HPA
Whether an antibody against AKAP1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Other membrane
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.58
- Highest tissue expression
- 195 nTPM
Expression across tissuesHPA
Tissue
- skeletal muscle: 195 nTPM
- tongue: 128 nTPM
- testis: 109 nTPM
- blood vessel: 85 nTPM
- heart muscle: 79 nTPM
- colon: 73 nTPM
Single-cell type
- late spermatids: 3,774 nCPM
- early spermatids: 746 nCPM
- enteric stem cells: 116 nCPM
- vascular smooth muscle cells: 112 nCPM
- thymic myoid cells: 112 nCPM
- colonocytes: 108 nCPM
Immune cell
- naive CD4 T-cell: 4 nTPM
- plasmacytoid DC: 4 nTPM
- NK-cell: 3.3 nTPM
- gdT-cell: 2.6 nTPM
- myeloid DC: 2.4 nTPM
- MAIT T-cell: 2.3 nTPM
Brain region
- basal ganglia: 62 nTPM
- amygdala: 55 nTPM
- cerebral cortex: 54 nTPM
- thalamus: 52 nTPM
- cerebellum: 49 nTPM
- white matter: 46 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.37
- gnomAD pLI
- 0.74
- gnomAD missense Z
- 1.18
- DepMap mean gene effect
- -0.01
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 7% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Tudor domain
- K Homology domain
- K Homology domain, type 1
- SNase-like, OB-fold superfamily
- K Homology domain, type 1 superfamily
- Tudor domain-containing
- KH domain
- Tudor domain
- A-kinase anchor protein 1, Tudor domain
- A-kinase anchor protein 1, type I K homology domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of AKAP1 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads AKAP1 as an antibody target. Whether an autoantibody or antibody against AKAP1 could matter depends on whether native AKAP1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
AKAP1 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label AKAP1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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