AIM2
Interferon-inducible protein AIM2
Also known as: AIM2_HUMAN, PYHIN4
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- O14862
- Gene
- AIM2
- Ensembl
- ENSG00000163568
- Chromosome
- 1
- Canonical length
- 343 aa
- Protein class
- Predicted intracellular proteins
- Subcellular location
- Nucleoplasm,Mitochondria,Cytosol
- Quaternary structure
- Homooligomer
OverviewNCBI Gene
AIM2 is a member of the IFI20X /IFI16 family. It plays a putative role in tumorigenic reversion and may control cell proliferation. Interferon-gamma induces expression of AIM2. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
343 residues, UniProt reviewed canonical sequence.
>O14862|AIM2
1 MESKYKEILL LTGLDNITDE ELDRFKFFLS DEFNIATGKL HTANRIQVAT LMIQNAGAVS
61 AVMKTIRIFQ KLNYMLLAKR LQEEKEKVDK QYKSVTKPKP LSQAEMSPAA SAAIRNDVAK
121 QRAAPKVSPH VKPEQKQMVA QQESIREGFQ KRCLPVMVLK AKKPFTFETQ EGKQEMFHAT
181 VATEKEFFFV KVFNTLLKDK FIPKRIIIIA RYYRHSGFLE VNSASRVLDA ESDQKVNVPL
241 NIIRKAGETP KINTLQTQPL GTIVNGLFVV QKVTEKKKNI LFDLSDNTGK MEVLGVRNED
301 TMKCKEGDKV RLTFFTLSKN GEKLQLTSGV HSTIKVIKAK KKTLocalizationUniProt · AlphaFold · HPA
Whether an antibody against AIM2 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.35
- Highest tissue expression
- 48 nTPM
Expression across tissuesHPA
Tissue
- lymph node: 48 nTPM
- tonsil: 47 nTPM
- spleen: 25 nTPM
- appendix: 21 nTPM
- small intestine: 16 nTPM
- urinary bladder: 13 nTPM
Single-cell type
- corticotrophs: 345 nCPM
- thyrotrophs: 296 nCPM
- somatotrophs: 228 nCPM
- lactotrophs: 201 nCPM
- choroid plexus epithelial cells: 171 nCPM
- b-cells: 137 nCPM
Immune cell
- memory B-cell: 146 nTPM
- naive B-cell: 65 nTPM
- basophil: 23 nTPM
- neutrophil: 17 nTPM
- T-reg: 12 nTPM
- non-classical monocyte: 8.5 nTPM
Brain region
- choroid plexus: 19 nTPM
- medulla oblongata: 2.7 nTPM
- pons: 2.3 nTPM
- amygdala: 1.9 nTPM
- cerebellum: 1.9 nTPM
- midbrain: 1.8 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about AIM2.
Disease | ImmuneIEDB
Conditions an epitope on AIM2 was assayed in.
- glioblastoma T cell
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.64
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.6
- DepMap mean gene effect
- 0.16
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- activation of innate immune response
- AIM2 inflammasome complex assembly
- brain development
- cellular response to interferon-beta
- cellular response to xenobiotic stimulus
- defense response to virus
- DNA damage response
- immune response
- innate immune response
- negative regulation of NF-kappaB transcription factor activity
- negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
- neuron cellular homeostasis
- pattern recognition receptor signaling pathway
- positive regulation of defense response to virus by host
- positive regulation of inflammatory response
- positive regulation of interleukin-1 beta production
- positive regulation of NF-kappaB transcription factor activity
- protein maturation
- pyroptosome complex assembly
- pyroptotic inflammatory response
- regulation of behavior
- T cell homeostasis
- tumor necrosis factor-mediated signaling pathway
Molecular functions
- cysteine-type endopeptidase activator activity
- double-stranded DNA binding
- identical protein binding
- pattern recognition receptor activity
- signaling adaptor activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of AIM2 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads AIM2 as an antibody target. Whether an autoantibody or antibody against AIM2 could matter depends on whether native AIM2 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
AIM2 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label AIM2 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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