TNFRSF14
Tumor necrosis factor receptor superfamily member 14
Also known as: ATAR, CD270, HVEA, HVEM, LIGHTR, TNR14_HUMAN, TR2
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q92956
- Gene
- TNFRSF14
- Ensembl
- ENSG00000157873
- Chromosome
- 1
- Canonical length
- 283 aa
- Protein class
- Cancer-related genes, CD markers, Human disease related genes, Predicted intracellular proteins, Predicted membrane proteins
- Subcellular location
- Plasma membrane,Cytosol
OverviewNCBI Gene
This gene encodes a member of the TNF (tumor necrosis factor) receptor superfamily. The encoded protein functions in signal transduction pathways that activate inflammatory and inhibitory T-cell immune response. It binds herpes simplex virus (HSV) viral envelope glycoprotein D (gD), mediating its entry into cells. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2014]
Canonical amino-acid sequenceUniProt
283 residues, UniProt reviewed canonical sequence.
>Q92956|TNFRSF14
1 MEPPGDWGPP PWRSTPKTDV LRLVLYLTFL GAPCYAPALP SCKEDEYPVG SECCPKCSPG
61 YRVKEACGEL TGTVCEPCPP GTYIAHLNGL SKCLQCQMCD PAMGLRASRN CSRTENAVCG
121 CSPGHFCIVQ DGDHCAACRA YATSSPGQRV QKGGTESQDT LCQNCPPGTF SPNGTLEECQ
181 HQTKCSWLVT KAGAGTSSSH WVWWFLSGSL VIVIVCSTVG LIICVKRRKP RGDVVKVIVS
241 VQRKRQEAEG EATVIEALQA PPDVTTVAVE ETIPSFTGRS PNHLocalizationUniProt · AlphaFold · HPA
Whether an antibody against TNFRSF14 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 1
- Mean surface accessibility (rSASA)
- 0.48
- Highest tissue expression
- 96 nTPM
Expression across tissuesHPA
Tissue
- spleen: 96 nTPM
- adrenal gland: 71 nTPM
- small intestine: 65 nTPM
- liver: 61 nTPM
- lung: 56 nTPM
- kidney: 56 nTPM
Single-cell type
- proximal tubule cells: 93 nCPM
- papillary tip epithelial cells: 32 nCPM
- renal collecting duct intercalated cells: 31 nCPM
- renal collecting duct principal cells: 31 nCPM
- podocytes: 28 nCPM
- renal connecting tubule cells: 25 nCPM
Immune cell
- neutrophil: 79 nTPM
- intermediate monocyte: 68 nTPM
- T-reg: 63 nTPM
- naive CD4 T-cell: 52 nTPM
- non-classical monocyte: 51 nTPM
- naive B-cell: 50 nTPM
Brain region
- choroid plexus: 4.8 nTPM
- cerebral cortex: 2.7 nTPM
- thalamus: 2.2 nTPM
- hippocampal formation: 2.1 nTPM
- medulla oblongata: 2 nTPM
- white matter: 2 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.44
- gnomAD pLI
- 0.81
- gnomAD missense Z
- 0.61
- DepMap mean gene effect
- 0.05
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- adaptive immune response
- cell surface receptor signaling pathway
- defense response to Gram-negative bacterium
- defense response to Gram-positive bacterium
- immune response
- innate immune response
- negative regulation of adaptive immune memory response
- negative regulation of alpha-beta T cell proliferation
- negative regulation of T cell proliferation
- positive regulation of cytokine production involved in immune response
- positive regulation of T cell migration
- T cell costimulation
Molecular functions
- cytokine binding
- receptor ligand activity
- tumor necrosis factor receptor activity
- ubiquitin protein ligase binding
- virus receptor activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
- TNFR/NGFR cysteine-rich region
- TNFR/NGFR cysteine-rich region
- Tumour necrosis factor receptor 14
- Tumor necrosis factor receptor 14/UL144, N-terminal
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of TNFRSF14 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads TNFRSF14 as an antibody target. Whether an autoantibody or antibody against TNFRSF14 could matter depends on whether native TNFRSF14 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
TNFRSF14 is annotated at the cell surface, where native TNFRSF14 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label TNFRSF14 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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