TNFSF14
Tumor necrosis factor ligand superfamily member 14
Also known as: CD258, HVEM-L, LIGHT, LTg, TNF14_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- O43557
- Gene
- TNFSF14
- Ensembl
- ENSG00000125735
- Chromosome
- 19
- Canonical length
- 240 aa
- Protein class
- CD markers, Predicted intracellular proteins, Predicted membrane proteins, Predicted secreted proteins
- Subcellular location
- Vesicles
- Secretome location
- Secreted to blood
- Quaternary structure
- Homotrimer
OverviewNCBI Gene
The protein encoded by this gene is a member of the tumor necrosis factor (TNF) ligand family. This protein is a ligand for TNFRSF14, which is a member of the tumor necrosis factor receptor superfamily, and which is also known as a herpesvirus entry mediator (HVEM). This protein may function as a costimulatory factor for the activation of lymphoid cells and as a deterrent to infection by herpesvirus. This protein has been shown to stimulate the proliferation of T cells, and trigger apoptosis of various tumor cells. This protein is also reported to prevent tumor necrosis factor alpha mediated apoptosis in primary hepatocyte. Two alternatively spliced transcript variant encoding distinct isoforms have been reported. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
240 residues, UniProt reviewed canonical sequence.
>O43557|TNFSF14
1 MEESVVRPSV FVVDGQTDIP FTRLGRSHRR QSCSVARVGL GLLLLLMGAG LAVQGWFLLQ
61 LHWRLGEMVT RLPDGPAGSW EQLIQERRSH EVNPAAHLTG ANSSLTGSGG PLLWETQLGL
121 AFLRGLSYHD GALVVTKAGY YYIYSKVQLG GVGCPLGLAS TITHGLYKRT PRYPEELELL
181 VSQQSPCGRA TSSSRVWWDS SFLGGVVHLE AGEKVVVRVL DERLVRLRDG TRSYFGAFMVLocalizationUniProt · AlphaFold · HPA
Whether an antibody against TNFSF14 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 1
- Mean surface accessibility (rSASA)
- 0.4
- Highest tissue expression
- 93 nTPM
Expression across tissuesHPA
Tissue
- liver: 93 nTPM
- adipose tissue: 24 nTPM
- fallopian tube: 6.2 nTPM
- small intestine: 5.1 nTPM
- ovary: 4.4 nTPM
- lung: 4.2 nTPM
Single-cell type
- neutrophils: 156 nCPM
- mesothelial cells: 68 nCPM
- epicardial cells: 55 nCPM
- nk-cells: 53 nCPM
- innate lymphoid cells: 41 nCPM
- t-cells: 36 nCPM
Immune cell
- neutrophil: 200 nTPM
- basophil: 141 nTPM
- eosinophil: 115 nTPM
- MAIT T-cell: 61 nTPM
- gdT-cell: 42 nTPM
- memory CD8 T-cell: 34 nTPM
Brain region
- cerebral cortex: 13 nTPM
- thalamus: 6.1 nTPM
- amygdala: 4.3 nTPM
- pons: 3.3 nTPM
- white matter: 3.2 nTPM
- choroid plexus: 2.6 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about TNFSF14.
Disease | ImmuneIEDB
Conditions an epitope on TNFSF14 was assayed in.
- colorectal cancer T cell
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.8
- gnomAD pLI
- 0.05
- gnomAD missense Z
- 0.64
- DepMap mean gene effect
- -0.02
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- apoptotic process
- cell surface receptor signaling pathway
- cellular response to mechanical stimulus
- immune response
- positive regulation of canonical NF-kappaB signal transduction
- positive regulation of extrinsic apoptotic signaling pathway
- positive regulation of myoblast differentiation
- positive regulation of myoblast fusion
- positive regulation of non-canonical NF-kappaB signal transduction
- positive regulation of T cell chemotaxis
- signal transduction
- T cell activation
- T cell chemotaxis
- T cell costimulation
- T cell homeostasis
- T cell proliferation
Molecular functions
- cysteine-type endopeptidase inhibitor activity involved in apoptotic process
- cytokine activity
- identical protein binding
- signaling receptor binding
- tumor necrosis factor receptor binding
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of TNFSF14 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads TNFSF14 as an antibody target. Whether an autoantibody or antibody against TNFSF14 could matter depends on whether native TNFSF14 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
TNFSF14 is annotated at the cell surface, where native TNFSF14 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label TNFSF14 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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