SPRED1
Sprouty-related, EVH1 domain-containing protein 1
Also known as: FLJ33903, PPP1R147, SPRE1_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q7Z699
- Gene
- SPRED1
- Ensembl
- ENSG00000166068
- Chromosome
- 15
- Canonical length
- 444 aa
- Protein class
- Disease related genes, Human disease related genes, Predicted intracellular proteins, Predicted membrane proteins
- Subcellular location
- Nucleoplasm
- Quaternary structure
- Homodimer
OverviewNCBI Gene
The protein encoded by this gene is a member of the Sprouty family of proteins and is phosphorylated by tyrosine kinase in response to several growth factors. The encoded protein can act as a homodimer or as a heterodimer with SPRED2 to regulate activation of the MAP kinase cascade. Defects in this gene are a cause of neurofibromatosis type 1-like syndrome (NFLS). [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
444 residues, UniProt reviewed canonical sequence.
>Q7Z699|SPRED1
1 MSEETATSDN DNSYARVRAV VMTRDDSSGG WLPLGGSGLS SVTVFKVPHQ EENGCADFFI
61 RGERLRDKMV VLECMLKKDL IYNKVTPTFH HWKIDDKKFG LTFQSPADAR AFDRGIRRAI
121 EDISQGCPES KNEAEGADDL QANEEDSSSS LVKDHLFQQE TVVTSEPYRS SNIRPSPFED
181 LNARRVYMQS QANQITFGQP GLDIQSRSME YVQRQISKEC GSLKSQNRVP LKSIRHVSFQ
241 DEDEIVRINP RDILIRRYAD YRHPDMWKND LERDDADSSI QFSKPDSKKS DYLYSCGDET
301 KLSSPKDSVV FKTQPSSLKI KKSKRRKEDG ERSRCVYCQE RFNHEENVRG KCQDAPDPIK
361 RCIYQVSCML CAESMLYHCM SDSEGDFSDP CSCDTSDDKF CLRWLALVAL SFIVPCMCCY
421 VPLRMCHRCG EACGCCGGKH KAAGLocalizationUniProt · AlphaFold · HPA
Whether an antibody against SPRED1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.49
- Highest tissue expression
- 29 nTPM
Expression across tissuesHPA
Tissue
- thyroid gland: 29 nTPM
- cerebral cortex: 19 nTPM
- basal ganglia: 17 nTPM
- lung: 16 nTPM
- amygdala: 14 nTPM
- placenta: 13 nTPM
Single-cell type
- microglia: 698 nCPM
- macrophages: 405 nCPM
- oligodendrocyte progenitor cells: 395 nCPM
- hofbauer cells: 385 nCPM
- bergmann glia: 336 nCPM
- astrocytes: 227 nCPM
Immune cell
- non-classical monocyte: 1.4 nTPM
- intermediate monocyte: 0.7 nTPM
- myeloid DC: 0.3 nTPM
- classical monocyte: 0.2 nTPM
- basophil: 0 nTPM
- eosinophil: 0 nTPM
Brain region
- basal ganglia: 43 nTPM
- midbrain: 42 nTPM
- medulla oblongata: 41 nTPM
- hypothalamus: 39 nTPM
- white matter: 38 nTPM
- cerebral cortex: 37 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about SPRED1.
Disease | AllUniProt
Conditions SPRED1 is implicated in, by any mechanism.
- Legius syndrome (LGSS) MIM:611431
Disease | GeneticClinVar
166 pathogenic / likely-pathogenic of 1,219 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.32
- gnomAD pLI
- 0.97
- gnomAD missense Z
- 1.17
- DepMap mean gene effect
- 0.14
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- negative regulation of angiogenesis
- negative regulation of cell migration involved in sprouting angiogenesis
- negative regulation of epithelial to mesenchymal transition
- negative regulation of ERK1 and ERK2 cascade
- negative regulation of intracellular signal transduction
- negative regulation of lens fiber cell differentiation
- negative regulation of MAPK cascade
- negative regulation of transforming growth factor beta receptor signaling pathway
- positive regulation of DNA damage response, signal transduction by p53 class mediator
- regulation of MAPK cascade
- vasculogenesis involved in coronary vascular morphogenesis
Molecular functions
- phosphatase binding
- protein kinase binding
- protein serine/threonine kinase inhibitor activity
- stem cell factor receptor binding
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of SPRED1 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads SPRED1 as an antibody target. Whether an autoantibody or antibody against SPRED1 could matter depends on whether native SPRED1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
SPRED1 is annotated at the cell surface, where native SPRED1 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label SPRED1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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