AVIL
Advillin
Also known as: ADVIL, AVIL_HUMAN, DOC6, FLJ12386, p92
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- O75366
- Gene
- AVIL
- Ensembl
- ENSG00000135407
- Chromosome
- 12
- Canonical length
- 819 aa
- Protein class
- Disease related genes, Human disease related genes, Plasma proteins, Predicted intracellular proteins
OverviewNCBI Gene
The protein encoded by this gene is a member of the gelsolin/villin family of actin regulatory proteins. This protein has structural similarity to villin. It binds actin and may play a role in the development of neuronal cells that form ganglia. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
819 residues, UniProt reviewed canonical sequence.
>O75366|AVIL
1 MPLTSAFRAV DNDPGIIVWR IEKMELALVP VSAHGNFYEG DCYVILSTRR VASLLSQDIH
61 FWIGKDSSQD EQSCAAIYTT QLDDYLGGSP VQHREVQYHE SDTFRGYFKQ GIIYKQGGVA
121 SGMKHVETNT YDVKRLLHVK GKRNIRATEV EMSWDSFNRG DVFLLDLGKV IIQWNGPESN
181 SGERLKAMLL AKDIRDRERG GRAKIGVIEG DKEAASPELM KVLQDTLGRR SIIKPTVPDE
241 IIDQKQKSTI MLYHISDSAG QLAVTEVATR PLVQDLLNHD DCYILDQSGT KIYVWKGKGA
301 TKAEKQAAMS KALGFIKMKS YPSSTNVETV NDGAESAMFK QLFQKWSVKD QTMGLGKTFS
361 IGKIAKVFQD KFDVTLLHTK PEVAAQERMV DDGNGKVEVW RIENLELVPV EYQWYGFFYG
421 GDCYLVLYTY EVNGKPHHIL YIWQGRHASQ DELAASAYQA VEVDRQFDGA AVQVRVRMGT
481 EPRHFMAIFK GKLVIFEGGT SRKGNAEPDP PVRLFQIHGN DKSNTKAVEV PAFASSLNSN
541 DVFLLRTQAE HYLWYGKGSS GDERAMAKEL ASLLCDGSEN TVAEGQEPAE FWDLLGGKTP
601 YANDKRLQQE ILDVQSRLFE CSNKTGQFVV TEITDFTQDD LNPTDVMLLD TWDQVFLWIG
661 AEANATEKES ALATAQQYLH THPSGRDPDT PILIIKQGFE PPIFTGWFLA WDPNIWSAGK
721 TYEQLKEELG DAAAIMRITA DMKNATLSLN SNDSEPKYYP IAVLLKNQNQ ELPEDVNPAK
781 KENYLSEQDF VSVFGITRGQ FAALPGWKQL QMKKEKGLFLocalizationUniProt · AlphaFold · HPA
Whether an antibody against AVIL can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.26
- Highest tissue expression
- 9.2 nTPM
Expression across tissuesHPA
Tissue
- skeletal muscle: 9.2 nTPM
- cerebellum: 7.9 nTPM
- retina: 4.2 nTPM
- small intestine: 3.9 nTPM
- thyroid gland: 3.9 nTPM
- duodenum: 3.8 nTPM
Single-cell type
- tuft cells: 611 nCPM
- myonuclei: 102 nCPM
- neutrophils: 85 nCPM
- adrenal cortex cells: 70 nCPM
- retinal bipolar cells: 70 nCPM
- retinal amacrine cells: 61 nCPM
Immune cell
- neutrophil: 2 nTPM
- eosinophil: 0.4 nTPM
- memory CD4 T-cell: 0.3 nTPM
- naive B-cell: 0.3 nTPM
- classical monocyte: 0.2 nTPM
- naive CD4 T-cell: 0.2 nTPM
Brain region
- cerebellum: 9.3 nTPM
- basal ganglia: 5.6 nTPM
- thalamus: 4.9 nTPM
- cerebral cortex: 4.7 nTPM
- choroid plexus: 4.6 nTPM
- hippocampal formation: 4.6 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about AVIL.
Disease | AllUniProt
Conditions AVIL is implicated in, by any mechanism.
- Nephrotic syndrome 21 (NPHS21) MIM:618594
Disease | GeneticClinVar
7 pathogenic / likely-pathogenic of 205 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Nephrotic syndrome, type 21
- Steroid-resistant nephrotic syndrome
- Nephrotic syndrome
- Uterine corpus endometrial carcinoma
- Gastric cancer
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.78
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.47
- DepMap mean gene effect
- -0.22
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- actin filament organization
- actin filament severing
- actin polymerization or depolymerization
- barbed-end actin filament capping
- cilium assembly
- nervous system development
- positive regulation of lamellipodium assembly
- positive regulation of neuron projection development
- regulation of diacylglycerol biosynthetic process
Molecular functions
- actin binding
- actin filament binding
- Arp2/3 complex binding
- phosphatidylinositol-4,5-bisphosphate binding
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of AVIL in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads AVIL as an antibody target. Whether an autoantibody or antibody against AVIL could matter depends on whether native AVIL is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
AVIL is annotated at the cell surface, where native AVIL is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label AVIL as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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