VAV3
Guanine nucleotide exchange factor VAV3
Also known as: VAV3_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9UKW4
- Gene
- VAV3
- Ensembl
- ENSG00000134215
- Chromosome
- 1
- Canonical length
- 847 aa
- Protein class
- Predicted intracellular proteins
OverviewNCBI Gene
This gene is a member of the VAV gene family. The VAV proteins are guanine nucleotide exchange factors (GEFs) for Rho family GTPases that activate pathways leading to actin cytoskeletal rearrangements and transcriptional alterations. This gene product acts as a GEF preferentially for RhoG, RhoA, and to a lesser extent, RAC1, and it associates maximally with the nucleotide-free states of these GTPases. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
847 residues, UniProt reviewed canonical sequence.
>Q9UKW4|VAV3
1 MEPWKQCAQW LIHCKVLPTN HRVTWDSAQV FDLAQTLRDG VLLCQLLNNL RAHSINLKEI
61 NLRPQMSQFL CLKNIRTFLT ACCETFGMRK SELFEAFDLF DVRDFGKVIE TLSRLSRTPI
121 ALATGIRPFP TEESINDEDI YKGLPDLIDE TLVEDEEDLY DCVYGEDEGG EVYEDLMKAE
181 EAHQPKCPEN DIRSCCLAEI KQTEEKYTET LESIEKYFMA PLKRFLTAAE FDSVFINIPE
241 LVKLHRNLMQ EIHDSIVNKN DQNLYQVFIN YKERLVIYGQ YCSGVESAIS SLDYISKTKE
301 DVKLKLEECS KRANNGKFTL RDLLVVPMQR VLKYHLLLQE LVKHTTDPTE KANLKLALDA
361 MKDLAQYVNE VKRDNETLRE IKQFQLSIEN LNQPVLLFGR PQGDGEIRIT TLDKHTKQER
421 HIFLFDLAVI VCKRKGDNYE MKEIIDLQQY KIANNPTTDK ENKKWSYGFY LIHTQGQNGL
481 EFYCKTKDLK KKWLEQFEMA LSNIRPDYAD SNFHDFKMHT FTRVTSCKVC QMLLRGTFYQ
541 GYLCFKCGAR AHKECLGRVD NCGRVNSGEQ GTLKLPEKRT NGLRRTPKQV DPGLPKMQVI
601 RNYSGTPPPA LHEGPPLQLQ AGDTVELLKG DAHSLFWQGR NLASGEVGFF PSDAVKPCPC
661 VPKPVDYSCQ PWYAGAMERL QAETELINRV NSTYLVRHRT KESGEYAISI KYNNEAKHIK
721 ILTRDGFFHI AENRKFKSLM ELVEYYKHHS LKEGFRTLDT TLQFPYKEPE HSAGQRGNRA
781 GNSLLSPKVL GIAIARYDFC ARDMRELSLL KGDVVKIYTK MSANGWWRGE VNGRVGWFPS
841 TYVEEDELocalizationUniProt · AlphaFold · HPA
Whether an antibody against VAV3 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.3
- Highest tissue expression
- 78 nTPM
Expression across tissuesHPA
Tissue
- kidney: 78 nTPM
- rectum: 48 nTPM
- skin: 46 nTPM
- colon: 39 nTPM
- esophagus: 33 nTPM
- placenta: 32 nTPM
Single-cell type
- hematopoietic stem cells: 1,133 nCPM
- neutrophils: 1,072 nCPM
- thymocytes: 876 nCPM
- distal convoluted tubule cells: 813 nCPM
- syncytiotrophoblasts: 778 nCPM
- choroid plexus epithelial cells: 750 nCPM
Immune cell
- basophil: 4.8 nTPM
- myeloid DC: 2.6 nTPM
- T-reg: 2.6 nTPM
- gdT-cell: 2.1 nTPM
- NK-cell: 2.1 nTPM
- naive B-cell: 2 nTPM
Brain region
- choroid plexus: 34 nTPM
- thalamus: 20 nTPM
- cerebral cortex: 16 nTPM
- midbrain: 16 nTPM
- cerebellum: 13 nTPM
- basal ganglia: 9.6 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.72
- gnomAD pLI
- 0
- gnomAD missense Z
- 1.13
- DepMap mean gene effect
- -0.1
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- angiogenesis
- B cell receptor signaling pathway
- cell migration
- DNA damage response
- Fc-epsilon receptor signaling pathway
- Fc-gamma receptor signaling pathway involved in phagocytosis
- immune response-regulating cell surface receptor signaling pathway
- integrin-mediated signaling pathway
- lamellipodium assembly
- neutrophil chemotaxis
- platelet activation
- positive regulation of B cell proliferation
- positive regulation of cell adhesion
- positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
- regulation of cell size
- regulation of small GTPase mediated signal transduction
- response to xenobiotic stimulus
- small GTPase-mediated signal transduction
- vesicle fusion
Molecular functions
- epidermal growth factor receptor binding
- GTPase activator activity
- guanyl-nucleotide exchange factor activity
- zinc ion binding
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Dbl homology domain
- SH2 domain
- Guanine-nucleotide dissociation stimulator, CDC24, conserved site
- SH3 domain
- Calponin homology domain
- Pleckstrin homology domain
- Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
- Smooth muscle protein/calponin
- PH-like domain superfamily
- CASAMP, second calponin-homology domain
- Dbl homology (DH) domain superfamily
- SH3-like domain superfamily
- SH2 domain superfamily
- CH domain superfamily
- Vav, PH domain
- SOS1/NGEF-like, PH domain
- SH2 domain
- Phorbol esters/diacylglycerol binding domain (C1 domain)
- RhoGEF domain
- Variant SH3 domain
- CAMSAP CH domain
- SOS1/NGEF-like PH domain
- VAV3 protein, second SH3 domain
- VAV3, SH2 domain
- VAV3 protein, first SH3 domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of VAV3 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads VAV3 as an antibody target. Whether an autoantibody or antibody against VAV3 could matter depends on whether native VAV3 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
VAV3 is annotated at the cell surface, where native VAV3 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label VAV3 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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