STAT4
Signal transducer and activator of transcription 4
Also known as: STAT4_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q14765
- Gene
- STAT4
- Ensembl
- ENSG00000138378
- Chromosome
- 2
- Canonical length
- 748 aa
- Protein class
- Cancer-related genes, Disease related genes, Human disease related genes, Predicted intracellular proteins, Transcription factors
- Subcellular location
- Nucleoplasm,Nuclear bodies,Flagellar centriole
- Quaternary structure
- Homodimer
OverviewNCBI Gene
The protein encoded by this gene is a member of the STAT family of transcription factors. In response to cytokines and growth factors, STAT family members are phosphorylated by the receptor associated kinases, and then form homo- or heterodimers that translocate to the cell nucleus where they act as transcription activators. This protein is essential for mediating responses to IL12 in lymphocytes, and regulating the differentiation of T helper cells. Mutations in this gene may be associated with systemic lupus erythematosus and rheumatoid arthritis. Alternate splicing results in multiple transcript variants that encode the same protein. [provided by RefSeq, Aug 2011]
Canonical amino-acid sequenceUniProt
748 residues, UniProt reviewed canonical sequence.
>Q14765|STAT4
1 MSQWNQVQQL EIKFLEQVDQ FYDDNFPMEI RHLLAQWIEN QDWEAASNNE TMATILLQNL
61 LIQLDEQLGR VSKEKNLLLI HNLKRIRKVL QGKFHGNPMH VAVVISNCLR EERRILAAAN
121 MPVQGPLEKS LQSSSVSERQ RNVEHKVAAI KNSVQMTEQD TKYLEDLQDE FDYRYKTIQT
181 MDQSDKNSAM VNQEVLTLQE MLNSLDFKRK EALSKMTQII HETDLLMNTM LIEELQDWKR
241 RQQIACIGGP LHNGLDQLQN CFTLLAESLF QLRRQLEKLE EQSTKMTYEG DPIPMQRTHM
301 LERVTFLIYN LFKNSFVVER QPCMPTHPQR PLVLKTLIQF TVKLRLLIKL PELNYQVKVK
361 ASIDKNVSTL SNRRFVLCGT NVKAMSIEES SNGSLSVEFR HLQPKEMKSS AGGKGNEGCH
421 MVTEELHSIT FETQICLYGL TIDLETSSLP VVMISNVSQL PNAWASIIWY NVSTNDSQNL
481 VFFNNPPPAT LSQLLEVMSW QFSSYVGRGL NSDQLHMLAE KLTVQSSYSD GHLTWAKFCK
541 EHLPGKSFTF WTWLEAILDL IKKHILPLWI DGYVMGFVSK EKERLLLKDK MPGTFLLRFS
601 ESHLGGITFT WVDHSESGEV RFHSVEPYNK GRLSALPFAD ILRDYKVIMA ENIPENPLKY
661 LYPDIPKDKA FGKHYSSQPC EVSRPTERGD KGYVPSVFIP ISTIRSDSTE PHSPSDLLPM
721 SPSVYAVLRE NLSPTTIETA MKSPYSAELocalizationUniProt · AlphaFold · HPA
Whether an antibody against STAT4 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.28
- Highest tissue expression
- 27 nTPM
Expression across tissuesHPA
Tissue
- testis: 27 nTPM
- heart muscle: 24 nTPM
- lymph node: 17 nTPM
- cerebral cortex: 16 nTPM
- pituitary gland: 16 nTPM
- bone marrow: 15 nTPM
Single-cell type
- nk-cells: 1,245 nCPM
- t-cells: 1,066 nCPM
- innate lymphoid cells: 843 nCPM
- thymocytes: 494 nCPM
- somatotrophs: 355 nCPM
- early spermatids: 353 nCPM
Immune cell
- gdT-cell: 122 nTPM
- MAIT T-cell: 108 nTPM
- memory CD8 T-cell: 101 nTPM
- naive CD8 T-cell: 96 nTPM
- NK-cell: 77 nTPM
- memory CD4 T-cell: 72 nTPM
Brain region
- cerebral cortex: 24 nTPM
- white matter: 14 nTPM
- hypothalamus: 12 nTPM
- basal ganglia: 12 nTPM
- pons: 9.1 nTPM
- midbrain: 7.5 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about STAT4.
Disease | AllUniProt
Conditions STAT4 is implicated in, by any mechanism.
- Systemic lupus erythematosus 11 (SLEB11) MIM:612253
- Rheumatoid arthritis (RA) MIM:180300
- Disabling pansclerotic morphea of childhood (DPMC) MIM:620443
Disease | GeneticClinVar
2 pathogenic / likely-pathogenic of 535 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Disabling pansclerotic morphea of childhood
Disease | ImmuneIEDB
Conditions an epitope on STAT4 was assayed in.
- rheumatoid arthritis B cell
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.35
- gnomAD pLI
- 0.77
- gnomAD missense Z
- 2.74
- DepMap mean gene effect
- -0.02
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cell surface receptor signaling pathway via JAK-STAT
- cytokine-mediated signaling pathway
- defense response
- interleukin-12-mediated signaling pathway
- positive regulation of transcription by RNA polymerase II
- regulation of cell population proliferation
- regulation of transcription by RNA polymerase II
- response to interleukin-6
- response to peptide hormone
- T-helper 1 cell differentiation
Molecular functions
- DNA-binding transcription factor activity
- DNA-binding transcription factor activity, RNA polymerase II-specific
- identical protein binding
- RNA polymerase II cis-regulatory region sequence-specific DNA binding
Cellular components
Protein domainsUniProt · Pfam · InterPro
- SH2 domain
- Transcription factor STAT
- p53-like transcription factor, DNA-binding domain superfamily
- STAT transcription factor, DNA-binding, N-terminal
- STAT transcription factor, protein interaction
- STAT transcription factor, all-alpha domain
- STAT transcription factor, DNA-binding
- STAT transcription factor, coiled coil
- STAT transcription factor, N-terminal domain superfamily
- SH2 domain superfamily
- Signal transducer and activator of transcription, linker domain
- SH2 domain
- STAT transcription factor, coiled-coil domain
- STAT protein, DNA binding domain
- STAT protein, protein interaction domain
- Signal transducer and activator of transcription, linker domain
- Signal transducer and activator of transcription 4, DNA-binding domain
- STAT4, SH2 domain
- Signal transducer and activator of transcription 4, coiled-coil domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of STAT4 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads STAT4 as an antibody target. Whether an autoantibody or antibody against STAT4 could matter depends on whether native STAT4 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
STAT4 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label STAT4 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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