PARVA
Alpha-parvin
Also known as: FLJ10793, FLJ12254, MXRA2, PARVA_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9NVD7
- Gene
- PARVA
- Ensembl
- ENSG00000197702
- Chromosome
- 11
- Canonical length
- 372 aa
- Protein class
- Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
- Subcellular location
- Actin filaments,Focal adhesion sites,Cytosol
OverviewNCBI Gene
This gene encodes a member of the parvin family of actin-binding proteins. Parvins are associated with focal contacts and contain calponin homology domains that bind to actin filaments. The encoded protein is part of the integrin-linked kinase signaling complex and plays a role in cell adhesion, motility and survival. [provided by RefSeq, Dec 2010]
Canonical amino-acid sequenceUniProt
372 residues, UniProt reviewed canonical sequence.
>Q9NVD7|PARVA
1 MATSPQKSPS VPKSPTPKSP PSRKKDDSFL GKLGGTLARR KKAKEVSELQ EEGMNAINLP
61 LSPIPFELDP EDTMLEENEV RTMVDPNSRS DPKLQELMKV LIDWINDVLV GERIIVKDLA
121 EDLYDGQVLQ KLFEKLESEK LNVAEVTQSE IAQKQKLQTV LEKINETLKL PPRSIKWNVD
181 SVHAKSLVAI LHLLVALSQY FRAPIRLPDH VSIQVVVVQK REGILQSRQI QEEITGNTEA
241 LSGRHERDAF DTLFDHAPDK LNVVKKTLIT FVNKHLNKLN LEVTELETQF ADGVYLVLLM
301 GLLEGYFVPL HSFFLTPDSF EQKVLNVSFA FELMQDGGLE KPKPRPEDIV NCDLKSTLRV
361 LYNLFTKYRN VELocalizationUniProt · AlphaFold · HPA
Whether an antibody against PARVA can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.34
- Highest tissue expression
- 89 nTPM
Expression across tissuesHPA
Tissue
- smooth muscle: 89 nTPM
- colon: 77 nTPM
- seminal vesicle: 65 nTPM
- endometrium: 60 nTPM
- adipose tissue: 58 nTPM
- cervix: 51 nTPM
Single-cell type
- podocytes: 463 nCPM
- pituitary stem cells: 402 nCPM
- smooth muscle cells: 386 nCPM
- adipocytes: 332 nCPM
- decidual stromal cells: 282 nCPM
- alveolar cells type 1: 279 nCPM
Immune cell
- MAIT T-cell: 1 nTPM
- memory CD4 T-cell: 0.3 nTPM
- gdT-cell: 0.1 nTPM
- memory CD8 T-cell: 0.1 nTPM
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
Brain region
- choroid plexus: 33 nTPM
- hypothalamus: 23 nTPM
- spinal cord: 23 nTPM
- medulla oblongata: 22 nTPM
- white matter: 21 nTPM
- cerebral cortex: 19 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.47
- gnomAD pLI
- 0.41
- gnomAD missense Z
- 1
- DepMap mean gene effect
- -0.01
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- actin cytoskeleton organization
- actin-mediated cell contraction
- cilium assembly
- establishment or maintenance of cell polarity
- establishment or maintenance of cell polarity regulating cell shape
- heterotypic cell-cell adhesion
- outflow tract septum morphogenesis
- protein stabilization
- smooth muscle cell chemotaxis
- sprouting angiogenesis
- substrate adhesion-dependent cell spreading
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of PARVA in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads PARVA as an antibody target. Whether an autoantibody or antibody against PARVA could matter depends on whether native PARVA is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
PARVA is annotated at the cell surface, where native PARVA is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label PARVA as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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