IL17RD
Interleukin-17 receptor D
Also known as: FLJ35755, I17RD_HUMAN, IL-17RD, IL17RLM, SEF
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q8NFM7
- Gene
- IL17RD
- Ensembl
- ENSG00000144730
- Chromosome
- 3
- Canonical length
- 739 aa
- Protein class
- Disease related genes, Human disease related genes, Predicted intracellular proteins, Predicted membrane proteins
- Subcellular location
- Nucleoplasm,Golgi apparatus
OverviewNCBI Gene
This gene encodes a membrane protein belonging to the interleukin-17 receptor (IL-17R) protein family. The encoded protein is a component of the interleukin-17 receptor signaling complex, and the interaction between this protein and IL-17R does not require the interleukin. The gene product also affects fibroblast growth factor signaling, inhibiting or stimulating growth through MAPK/ERK signaling. Alternate splicing generates multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Jan 2016]
Canonical amino-acid sequenceUniProt
739 residues, UniProt reviewed canonical sequence.
>Q8NFM7|IL17RD
1 MAPWLQLCSV FFTVNACLNG SQLAVAAGGS GRARGADTCG WRGVGPASRN SGLYNITFKY
61 DNCTTYLNPV GKHVIADAQN ITISQYACHD QVAVTILWSP GALGIEFLKG FRVILEELKS
121 EGRQCQQLIL KDPKQLNSSF KRTGMESQPF LNMKFETDYF VKVVPFPSIK NESNYHPFFF
181 RTRACDLLLQ PDNLACKPFW KPRNLNISQH GSDMQVSFDH APHNFGFRFF YLHYKLKHEG
241 PFKRKTCKQE QTTETTSCLL QNVSPGDYII ELVDDTNTTR KVMHYALKPV HSPWAGPIRA
301 VAITVPLVVI SAFATLFTVM CRKKQQENIY SHLDEESSES STYTAALPRE RLRPRPKVFL
361 CYSSKDGQNH MNVVQCFAYF LQDFCGCEVA LDLWEDFSLC REGQREWVIQ KIHESQFIIV
421 VCSKGMKYFV DKKNYKHKGG GRGSGKGELF LVAVSAIAEK LRQAKQSSSA ALSKFIAVYF
481 DYSCEGDVPG ILDLSTKYRL MDNLPQLCSH LHSRDHGLQE PGQHTRQGSR RNYFRSKSGR
541 SLYVAICNMH QFIDEEPDWF EKQFVPFHPP PLRYREPVLE KFDSGLVLND VMCKPGPESD
601 FCLKVEAAVL GATGPADSQH ESQHGGLDQD GEARPALDGS AALQPLLHTV KAGSPSDMPR
661 DSGIYDSSVP SSELSLPLME GLSTDQTETS SLTESVSSSS GLGEEEPPAL PSKLLSSGSC
721 KADLGCRSYT DELHAVAPLLocalizationUniProt · AlphaFold · HPA
Whether an antibody against IL17RD can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 1
- Mean surface accessibility (rSASA)
- 0.45
- Highest tissue expression
- 13 nTPM
Expression across tissuesHPA
Tissue
- endometrium: 13 nTPM
- choroid plexus: 12 nTPM
- smooth muscle: 11 nTPM
- epididymis: 10 nTPM
- testis: 9.1 nTPM
- ovary: 9 nTPM
Single-cell type
- choroid plexus epithelial cells: 108 nCPM
- podocytes: 79 nCPM
- breast myoepithelial cells: 59 nCPM
- fibro-adipogenic progenitors: 57 nCPM
- pituitary stem cells: 51 nCPM
- peritubular myoid cells: 45 nCPM
Immune cell
- basophil: 0.1 nTPM
- neutrophil: 0.1 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
Brain region
- choroid plexus: 62 nTPM
- midbrain: 21 nTPM
- medulla oblongata: 20 nTPM
- hypothalamus: 15 nTPM
- spinal cord: 14 nTPM
- white matter: 14 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about IL17RD.
Disease | AllUniProt
Conditions IL17RD is implicated in, by any mechanism.
- Hypogonadotropic hypogonadism 18 with or without anosmia (HH18) MIM:615267
Disease | GeneticClinVar
5 pathogenic / likely-pathogenic of 316 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Hypogonadotropic hypogonadism 18 with anosmia
- Delayed puberty
- Cerebral arteriovenous malformation
- Hypogonadotropic hypogonadism 18 with or without anosmia
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.69
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.28
- DepMap mean gene effect
- -0.07
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- negative regulation of epithelial to mesenchymal transition
- negative regulation of transforming growth factor beta receptor signaling pathway
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- SEFIR domain
- Toll/interleukin-1 receptor homology (TIR) domain superfamily
- Interleukin-17 receptor-like
- SEFIR domain
- Interleukin 17 receptor D, N-terminal
- N-terminus of interleukin 17 receptor D
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of IL17RD in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads IL17RD as an antibody target. Whether an autoantibody or antibody against IL17RD could matter depends on whether native IL17RD is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
IL17RD is annotated at the cell surface, where native IL17RD is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label IL17RD as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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