HSD17B10
3-hydroxyacyl-CoA dehydrogenase type-2
Also known as: 17b-HSD10, ABAD, CAMR, ERAB, HADH2, HCD2_HUMAN, MHBD, MRPP2, MRXS10, SDR5C1
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q99714
- Gene
- HSD17B10
- Ensembl
- ENSG00000072506
- Chromosome
- X
- Canonical length
- 261 aa
- Protein class
- Disease related genes, Enzymes, FDA approved drug targets, Human disease related genes, Metabolic proteins, Plasma proteins, Predicted intracellular proteins
- Quaternary structure
- Homotetramer
OverviewNCBI Gene
This gene encodes 3-hydroxyacyl-CoA dehydrogenase type II, a member of the short-chain dehydrogenase/reductase superfamily. The gene product is a mitochondrial protein that catalyzes the oxidation of a wide variety of fatty acids and steroids, and is a subunit of mitochondrial ribonuclease P, which is involved in tRNA maturation. The protein has been implicated in the development of Alzheimer disease, and mutations in the gene are the cause of 17beta-hydroxysteroid dehydrogenase type 10 (HSD10) deficiency. Several alternatively spliced transcript variants have been identified, but the full-length nature of only two transcript variants has been determined. [provided by RefSeq, Aug 2014]
Canonical amino-acid sequenceUniProt
261 residues, UniProt reviewed canonical sequence.
>Q99714|HSD17B10
1 MAAACRSVKG LVAVITGGAS GLGLATAERL VGQGASAVLL DLPNSGGEAQ AKKLGNNCVF
61 APADVTSEKD VQTALALAKG KFGRVDVAVN CAGIAVASKT YNLKKGQTHT LEDFQRVLDV
121 NLMGTFNVIR LVAGEMGQNE PDQGGQRGVI INTASVAAFE GQVGQAAYSA SKGGIVGMTL
181 PIARDLAPIG IRVMTIAPGL FGTPLLTSLP EKVCNFLASQ VPFPSRLGDP AEYAHLVQAI
241 IENPFLNGEV IRLDGAIRMQ PLocalizationUniProt · AlphaFold · HPA
Whether an antibody against HSD17B10 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.26
- Highest tissue expression
- 241 nTPM
Expression across tissuesHPA
Tissue
- liver: 241 nTPM
- esophagus: 105 nTPM
- adrenal gland: 104 nTPM
- kidney: 97 nTPM
- heart muscle: 97 nTPM
- skeletal muscle: 86 nTPM
Single-cell type
- hepatocytes: 514 nCPM
- esophageal suprabasal cells: 430 nCPM
- esophageal basal cells: 263 nCPM
- extravillous trophoblasts: 263 nCPM
- esophageal apical cells: 262 nCPM
- migrating cytotrophoblasts: 211 nCPM
Immune cell
- myeloid DC: 177 nTPM
- classical monocyte: 128 nTPM
- total PBMC: 126 nTPM
- intermediate monocyte: 125 nTPM
- T-reg: 115 nTPM
- naive B-cell: 111 nTPM
Brain region
- medulla oblongata: 45 nTPM
- cerebellum: 44 nTPM
- thalamus: 43 nTPM
- hypothalamus: 41 nTPM
- white matter: 40 nTPM
- midbrain: 40 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about HSD17B10.
Disease | AllUniProt
Conditions HSD17B10 is implicated in, by any mechanism.
- HSD10 mitochondrial disease (HSD10MD) MIM:300438
Disease | GeneticClinVar
18 pathogenic / likely-pathogenic of 209 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- HSD10 mitochondrial disease
- See cases
- HSD17B10-related disorder
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.34
- gnomAD pLI
- 0.94
- gnomAD missense Z
- 2.59
- DepMap mean gene effect
- -0.42
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 6% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- androgen metabolic process
- bile acid biosynthetic process
- C21-steroid hormone metabolic process
- estrogen metabolic process
- fatty acid beta-oxidation
- fatty acid metabolic process
- L-isoleucine catabolic process
- lipid metabolic process
- mitochondrial tRNA 3'-end processing
- mitochondrial tRNA 5'-end processing
- mitochondrial tRNA methylation
- mitochondrion organization
- protein homotetramerization
- brexanolone metabolic process
Molecular functions
- (3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity
- 17-beta-hydroxysteroid dehydrogenase (NAD+) activity
- androstan-3-alpha,17-beta-diol dehydrogenase (NAD+) activity
- estradiol 17-beta-dehydrogenase [NAD(P)+] activity
- RNA binding
- testosterone dehydrogenase (NAD+) activity
- tRNA binding
- 3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity
- cardiolipin dehydrogenase (NAD+) activity
- chenodeoxycholate 7-alpha-dehydrogenase (NAD+) activity
- cholate 7-alpha-dehydrogenase (NAD+) activity
- isoursodeoxycholate 7-beta-dehydrogenase (NAD+) activity
- ursodeoxycholate 7-beta-dehydrogenase (NAD+) activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of HSD17B10 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads HSD17B10 as an antibody target. Whether an autoantibody or antibody against HSD17B10 could matter depends on whether native HSD17B10 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
HSD17B10 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label HSD17B10 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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