CFL2
Cofilin-2
Also known as: COF2_HUMAN, NEM7
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9Y281
- Gene
- CFL2
- Ensembl
- ENSG00000165410
- Chromosome
- 14
- Canonical length
- 166 aa
- Protein class
- Disease related genes, Human disease related genes, Plasma proteins, Predicted intracellular proteins
- Subcellular location
- Nucleoplasm,Plasma membrane,Cytosol
OverviewNCBI Gene
This gene encodes an intracellular protein that is involved in the regulation of actin-filament dynamics. This protein is a major component of intranuclear and cytoplasmic actin rods. It can bind G- and F-actin in a 1:1 ratio of cofilin to actin, and it reversibly controls actin polymerization and depolymerization in a pH-dependent manner. Mutations in this gene cause nemaline myopathy type 7, a form of congenital myopathy. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2009]
Canonical amino-acid sequenceUniProt
166 residues, UniProt reviewed canonical sequence.
>Q9Y281|CFL2
1 MASGVTVNDE VIKVFNDMKV RKSSTQEEIK KRKKAVLFCL SDDKRQIIVE EAKQILVGDI
61 GDTVEDPYTS FVKLLPLNDC RYALYDATYE TKESKKEDLV FIFWAPESAP LKSKMIYASS
121 KDAIKKKFTG IKHEWQVNGL DDIKDRSTLG EKLGGNVVVS LEGKPLLocalizationUniProt · AlphaFold · HPA
Whether an antibody against CFL2 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.29
- Highest tissue expression
- 675 nTPM
Expression across tissuesHPA
Tissue
- skeletal muscle: 675 nTPM
- tongue: 641 nTPM
- heart muscle: 349 nTPM
- liver: 118 nTPM
- blood vessel: 108 nTPM
- smooth muscle: 107 nTPM
Single-cell type
- smooth muscle cells: 374 nCPM
- thymic myoid cells: 275 nCPM
- decidual stromal cells: 195 nCPM
- epididymal clear cells: 176 nCPM
- myonuclei: 140 nCPM
- alveolar cells type 1: 133 nCPM
Immune cell
- memory B-cell: 4.9 nTPM
- MAIT T-cell: 3.1 nTPM
- naive B-cell: 3 nTPM
- memory CD4 T-cell: 2.2 nTPM
- memory CD8 T-cell: 2.1 nTPM
- T-reg: 2.1 nTPM
Brain region
- white matter: 195 nTPM
- basal ganglia: 131 nTPM
- cerebellum: 116 nTPM
- pons: 112 nTPM
- medulla oblongata: 110 nTPM
- hypothalamus: 106 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about CFL2.
Disease | AllUniProt
Conditions CFL2 is implicated in, by any mechanism.
- Nemaline myopathy 7 (NEM7) MIM:610687
Disease | GeneticClinVar
9 pathogenic / likely-pathogenic of 163 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Nemaline myopathy 7
- CFL2-related disorder
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.53
- gnomAD pLI
- 0
- gnomAD missense Z
- 1.61
- DepMap mean gene effect
- -0.09
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- actin filament depolymerization
- actin filament fragmentation
- actin filament severing
- muscle cell cellular homeostasis
- positive regulation of actin filament depolymerization
- sarcomere organization
- skeletal muscle tissue development
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of CFL2 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads CFL2 as an antibody target. Whether an autoantibody or antibody against CFL2 could matter depends on whether native CFL2 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
CFL2 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label CFL2 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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