TUBB6
Tubulin beta-6 chain
Also known as: HsT1601, MGC4083, TBB6_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9BUF5
- Gene
- TUBB6
- Ensembl
- ENSG00000176014
- Chromosome
- 18
- Canonical length
- 446 aa
- Protein class
- Disease related genes, Human disease related genes, Plasma proteins, Predicted intracellular proteins
- Subcellular location
- Microtubules,Cytokinetic bridge,Mitotic spindle,Primary cilium,Basal body,Flagellar centriole,Principal piece,End piece
OverviewNCBI Gene
Predicted to enable GTP binding activity. Predicted to be a structural constituent of cytoskeleton. Predicted to be involved in microtubule cytoskeleton organization and mitotic cell cycle. Located in intercellular bridge; microtubule; and mitotic spindle. [provided by Alliance of Genome Resources, Jul 2025]
Canonical amino-acid sequenceUniProt
446 residues, UniProt reviewed canonical sequence.
>Q9BUF5|TUBB6
1 MREIVHIQAG QCGNQIGTKF WEVISDEHGI DPAGGYVGDS ALQLERINVY YNESSSQKYV
61 PRAALVDLEP GTMDSVRSGP FGQLFRPDNF IFGQTGAGNN WAKGHYTEGA ELVDAVLDVV
121 RKECEHCDCL QGFQLTHSLG GGTGSGMGTL LISKIREEFP DRIMNTFSVM PSPKVSDTVV
181 EPYNATLSVH QLVENTDETY CIDNEALYDI CFRTLKLTTP TYGDLNHLVS ATMSGVTTSL
241 RFPGQLNADL RKLAVNMVPF PRLHFFMPGF APLTSRGSQQ YRALTVPELT QQMFDARNMM
301 AACDPRHGRY LTVATVFRGP MSMKEVDEQM LAIQSKNSSY FVEWIPNNVK VAVCDIPPRG
361 LKMASTFIGN STAIQELFKR ISEQFSAMFR RKAFLHWFTG EGMDEMEFTE AESNMNDLVS
421 EYQQYQDATA NDGEEAFEDE EEEIDGLocalizationUniProt · AlphaFold · HPA
Whether an antibody against TUBB6 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.21
- Highest tissue expression
- 221 nTPM
Expression across tissuesHPA
Tissue
- esophagus: 221 nTPM
- adipose tissue: 200 nTPM
- colon: 195 nTPM
- endometrium: 170 nTPM
- blood vessel: 168 nTPM
- heart muscle: 147 nTPM
Single-cell type
- esophageal apical cells: 1,568 nCPM
- extravillous trophoblasts: 830 nCPM
- esophageal suprabasal cells: 485 nCPM
- decidual stromal cells: 382 nCPM
- alveolar cells type 1: 376 nCPM
- smooth muscle cells: 327 nCPM
Immune cell
- plasmacytoid DC: 157 nTPM
- naive B-cell: 59 nTPM
- memory B-cell: 42 nTPM
- myeloid DC: 25 nTPM
- classical monocyte: 19 nTPM
- total PBMC: 13 nTPM
Brain region
- choroid plexus: 53 nTPM
- medulla oblongata: 33 nTPM
- thalamus: 32 nTPM
- midbrain: 27 nTPM
- pons: 25 nTPM
- cerebellum: 23 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about TUBB6.
Disease | AllUniProt
Conditions TUBB6 is implicated in, by any mechanism.
- Facial palsy, congenital, with ptosis and velopharyngeal dysfunction (FPVEPD) MIM:617732
Disease | GeneticClinVar
2 pathogenic / likely-pathogenic of 70 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Facial palsy, congenital, with ptosis and velopharyngeal dysfunction
- Ptosis
Disease | ImmuneIEDB
Conditions an epitope on TUBB6 was assayed in.
- multiple sclerosis B cell
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.04
- gnomAD pLI
- 0
- gnomAD missense Z
- 2.64
- DepMap mean gene effect
- 0.09
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Tubulin
- Beta tubulin
- Tubulin/FtsZ, GTPase domain
- Tubulin/FtsZ, C-terminal
- Beta tubulin, autoregulation binding site
- Tubulin, conserved site
- Tubulin/FtsZ, 2-layer sandwich domain
- Tubulin, C-terminal
- Tubulin/FtsZ, GTPase domain superfamily
- Tubulin/FtsZ-like, C-terminal domain
- Tubulin/FtsZ family, GTPase domain
- Tubulin C-terminal domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of TUBB6 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads TUBB6 as an antibody target. Whether an autoantibody or antibody against TUBB6 could matter depends on whether native TUBB6 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
TUBB6 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label TUBB6 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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