TNFRSF8
Tumor necrosis factor receptor superfamily member 8
Also known as: CD30, D1S166E, KI-1, TNR8_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P28908
- Gene
- TNFRSF8
- Ensembl
- ENSG00000120949
- Chromosome
- 1
- Canonical length
- 595 aa
- Protein class
- Cancer-related genes, CD markers, FDA approved drug targets, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
- Subcellular location
- Plasma membrane
OverviewNCBI Gene
The protein encoded by this gene is a member of the TNF-receptor superfamily. This receptor is expressed by activated, but not by resting, T and B cells. TRAF2 and TRAF5 can interact with this receptor, and mediate the signal transduction that leads to the activation of NF-kappaB. This receptor is a positive regulator of apoptosis, and also has been shown to limit the proliferative potential of autoreactive CD8 effector T cells and protect the body against autoimmunity. Two alternatively spliced transcript variants of this gene encoding distinct isoforms have been reported. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
595 residues, UniProt reviewed canonical sequence.
>P28908|TNFRSF8
1 MRVLLAALGL LFLGALRAFP QDRPFEDTCH GNPSHYYDKA VRRCCYRCPM GLFPTQQCPQ
61 RPTDCRKQCE PDYYLDEADR CTACVTCSRD DLVEKTPCAW NSSRVCECRP GMFCSTSAVN
121 SCARCFFHSV CPAGMIVKFP GTAQKNTVCE PASPGVSPAC ASPENCKEPS SGTIPQAKPT
181 PVSPATSSAS TMPVRGGTRL AQEAASKLTR APDSPSSVGR PSSDPGLSPT QPCPEGSGDC
241 RKQCEPDYYL DEAGRCTACV SCSRDDLVEK TPCAWNSSRT CECRPGMICA TSATNSCARC
301 VPYPICAAET VTKPQDMAEK DTTFEAPPLG TQPDCNPTPE NGEAPASTSP TQSLLVDSQA
361 SKTLPIPTSA PVALSSTGKP VLDAGPVLFW VILVLVVVVG SSAFLLCHRR ACRKRIRQKL
421 HLCYPVQTSQ PKLELVDSRP RRSSTQLRSG ASVTEPVAEE RGLMSQPLME TCHSVGAAYL
481 ESLPLQDASP AGGPSSPRDL PEPRVSTEHT NNKIEKIYIM KADTVIVGTV KAELPEGRGL
541 AGPAEPELEE ELEADHTPHY PEQETEPPLG SCSDVMLSVE EEGKEDPLPT AASGKLocalizationUniProt · AlphaFold · HPA
Whether an antibody against TNFRSF8 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 1
- Mean surface accessibility (rSASA)
- 0.6
- Highest tissue expression
- 5.1 nTPM
Expression across tissuesHPA
Tissue
- adipose tissue: 5.1 nTPM
- breast: 3.3 nTPM
- appendix: 2.9 nTPM
- stomach: 2.4 nTPM
- basal ganglia: 2.1 nTPM
- heart muscle: 1.9 nTPM
Single-cell type
- epicardial cells: 100 nCPM
- mesothelial cells: 36 nCPM
- neutrophils: 20 nCPM
- monocytes: 17 nCPM
- mast cells: 14 nCPM
- late spermatids: 13 nCPM
Immune cell
- non-classical monocyte: 97 nTPM
- intermediate monocyte: 59 nTPM
- neutrophil: 18 nTPM
- classical monocyte: 18 nTPM
- myeloid DC: 8.7 nTPM
- total PBMC: 8.5 nTPM
Brain region
- basal ganglia: 4.8 nTPM
- thalamus: 1.5 nTPM
- cerebral cortex: 0.7 nTPM
- medulla oblongata: 0.6 nTPM
- white matter: 0.5 nTPM
- choroid plexus: 0.4 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.36
- gnomAD pLI
- 0.86
- gnomAD missense Z
- 0.94
- DepMap mean gene effect
- -0.22
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 3% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cellular response to mechanical stimulus
- negative regulation of cell population proliferation
- positive regulation of apoptotic process
- positive regulation of TRAIL production
- positive regulation of tumor necrosis factor production
- signal transduction
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- TNFR/NGFR cysteine-rich region
- TNFR/NGFR cysteine-rich region
- Tumour necrosis factor receptor 8
- Tumour necrosis factor receptor 8, N-terminal
- Tumor necrosis factor receptor superfamily member 8
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of TNFRSF8 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads TNFRSF8 as an antibody target. Whether an autoantibody or antibody against TNFRSF8 could matter depends on whether native TNFRSF8 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
TNFRSF8 is annotated at the cell surface, where native TNFRSF8 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label TNFRSF8 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
Loading the interactive Seroatlas protein explorer...