Seroatlas · Human Serome Atlas

SH3GLB2

Endophilin-B2

Also known as: KIAA1848, SHLB2_HUMAN

Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene

Protein identityUniProt · HPA

UniProt accession
Q9NR46
Gene
SH3GLB2
Ensembl
ENSG00000148341
Chromosome
9
Canonical length
395 aa
Protein class
Predicted intracellular proteins
Subcellular location
Nucleoplasm,Cytosol
Quaternary structure
Homodimer

OverviewNCBI Gene

Enables identical protein binding activity. Predicted to be involved in membrane organization and postsynaptic neurotransmitter receptor internalization. Located in cytosol and nucleoplasm. [provided by Alliance of Genome Resources, Jul 2025]

Canonical amino-acid sequenceUniProt

395 residues, UniProt reviewed canonical sequence.

>Q9NR46|SH3GLB2
     1  MDFNMKKLAS DAGIFFTRAV QFTEEKFGQA EKTELDAHFE NLLARADSTK NWTEKILRQT
    61  EVLLQPNPSA RVEEFLYEKL DRKVPSRVTN GELLAQYMAD AASELGPTTP YGKTLIKVAE
   121  AEKQLGAAER DFIHTASISF LTPLRNFLEG DWKTISKERR LLQNRRLDLD ACKARLKKAK
   181  AAEAKATTVP DFQETRPRNY ILSASASALW NDEVDKAEQE LRVAQTEFDR QAEVTRLLLE
   241  GISSTHVNHL RCLHEFVKSQ TTYYAQCYRH MLDLQKQLGR FPGTFVGTTE PASPPLSSTS
   301  PTTAAATMPV VPSVASLAPP GEASLCLEEV APPASGTRKA RVLYDYEAAD SSELALLADE
   361  LITVYSLPGM DPDWLIGERG NKKGKVPVTY LELLS

LocalizationUniProt · AlphaFold · HPA

Whether an antibody against SH3GLB2 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.

Antibody reachability
Intracellular
Secreted
No
Transmembrane segments
0
Mean surface accessibility (rSASA)
0.4
Highest tissue expression
142 nTPM

Expression across tissuesHPA

Tissue

  • cerebral cortex: 142 nTPM
  • amygdala: 118 nTPM
  • skin: 113 nTPM
  • hippocampal formation: 111 nTPM
  • spinal cord: 106 nTPM
  • esophagus: 99 nTPM

Single-cell type

  • esophageal apical cells: 240 nCPM
  • syncytiotrophoblasts: 193 nCPM
  • cytotrophoblasts: 156 nCPM
  • urothelial cells: 114 nCPM
  • oligodendrocytes: 111 nCPM
  • prostatic club cells: 109 nCPM

Immune cell

  • plasmacytoid DC: 3.7 nTPM
  • eosinophil: 3.6 nTPM
  • memory B-cell: 3.6 nTPM
  • NK-cell: 2.6 nTPM
  • non-classical monocyte: 2.6 nTPM
  • MAIT T-cell: 2.3 nTPM

Brain region

  • cerebral cortex: 130 nTPM
  • white matter: 116 nTPM
  • basal ganglia: 109 nTPM
  • amygdala: 105 nTPM
  • hippocampal formation: 105 nTPM
  • pons: 96 nTPM

Genetic constraint and essentialitygnomAD · DepMap

Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.

gnomAD LOEUF (loss-of-function intolerance)
0.74
gnomAD pLI
0
gnomAD missense Z
1.38
DepMap mean gene effect
-0.05
DepMap dependency class
selective

Cancer expressionTCGA

Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).

OntologyGO

Biological processes

Molecular functions

Cellular components

Protein domainsUniProt · Pfam · InterPro

KeywordsUniProt

InteractionsUniProt · HPA

Protein binding partners of SH3GLB2 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.

Antibody and autoantibody relevanceSeroatlas analysis

Seroatlas reads SH3GLB2 as an antibody target. Whether an autoantibody or antibody against SH3GLB2 could matter depends on whether native SH3GLB2 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.

SH3GLB2 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.

Annotation status

The present source text does not explicitly label SH3GLB2 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.

Canonical record: https://seroatlas.com/gene/SH3GLB2. Study-independent annotations aggregated from UniProt, Human Protein Atlas, PubMed, IEDB, Pfam, InterPro, Gene Ontology, AlphaFold, gnomAD, DepMap, ClinVar, TCGA. Catalog release seroatlas-reviewed-human-uniprot-20260313.

Seroatlas is the reference for exploring autoantibody and antibody serology at the human-protein level: the autoreactome and human serome, multiplex serology (HuProt, HuScan, VirScan, PhIP-Seq).

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