POLL
DNA polymerase lambda
Also known as: DPOLL_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9UGP5
- Gene
- POLL
- Ensembl
- ENSG00000166169
- Chromosome
- 10
- Canonical length
- 575 aa
- Protein class
- Enzymes, Metabolic proteins, Predicted intracellular proteins
- Subcellular location
- Nucleoplasm
OverviewNCBI Gene
This gene encodes a DNA polymerase. DNA polymerases catalyze DNA-template-directed extension of the 3'-end of a DNA strand. This particular polymerase, which is a member of the X family of DNA polymerases, likely plays a role in non-homologous end joining and other DNA repair processes. Alternatively spliced transcript variants have been described. [provided by RefSeq, Mar 2010]
Canonical amino-acid sequenceUniProt
575 residues, UniProt reviewed canonical sequence.
>Q9UGP5|POLL
1 MDPRGILKAF PKRQKIHADA SSKVLAKIPR REEGEEAEEW LSSLRAHVVR TGIGRARAEL
61 FEKQIVQHGG QLCPAQGPGV THIVVDEGMD YERALRLLRL PQLPPGAQLV KSAWLSLCLQ
121 ERRLVDVAGF SIFIPSRYLD HPQPSKAEQD ASIPPGTHEA LLQTALSPPP PPTRPVSPPQ
181 KAKEAPNTQA QPISDDEASD GEETQVSAAD LEALISGHYP TSLEGDCEPS PAPAVLDKWV
241 CAQPSSQKAT NHNLHITEKL EVLAKAYSVQ GDKWRALGYA KAINALKSFH KPVTSYQEAC
301 SIPGIGKRMA EKIIEILESG HLRKLDHISE SVPVLELFSN IWGAGTKTAQ MWYQQGFRSL
361 EDIRSQASLT TQQAIGLKHY SDFLERMPRE EATEIEQTVQ KAAQAFNSGL LCVACGSYRR
421 GKATCGDVDV LITHPDGRSH RGIFSRLLDS LRQEGFLTDD LVSQEENGQQ QKYLGVCRLP
481 GPGRRHRRLD IIVVPYSEFA CALLYFTGSA HFNRSMRALA KTKGMSLSEH ALSTAVVRNT
541 HGCKVGPGRV LPTPTEKDVF RLLGLPYREP AERDWLocalizationUniProt · AlphaFold · HPA
Whether an antibody against POLL can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.36
- Highest tissue expression
- 43 nTPM
Expression across tissuesHPA
Tissue
- pancreas: 43 nTPM
- testis: 39 nTPM
- skeletal muscle: 32 nTPM
- pituitary gland: 27 nTPM
- stomach: 26 nTPM
- liver: 26 nTPM
Single-cell type
- late spermatids: 85 nCPM
- late primary spermatocytes: 71 nCPM
- proximal tubule cells: 31 nCPM
- choroid plexus epithelial cells: 29 nCPM
- pancreatic acinar cells: 28 nCPM
- lactotrophs: 26 nCPM
Immune cell
- naive CD4 T-cell: 12 nTPM
- myeloid DC: 12 nTPM
- MAIT T-cell: 11 nTPM
- T-reg: 10 nTPM
- NK-cell: 9.5 nTPM
- classical monocyte: 9.2 nTPM
Brain region
- choroid plexus: 31 nTPM
- cerebral cortex: 30 nTPM
- basal ganglia: 30 nTPM
- hippocampal formation: 29 nTPM
- pons: 29 nTPM
- white matter: 29 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.06
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.55
- DepMap mean gene effect
- -0.03
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- base-excision repair, gap-filling
- DNA biosynthetic process
- DNA replication
- double-strand break repair via homologous recombination
- double-strand break repair via nonhomologous end joining
- nucleotide-excision repair
- somatic hypermutation of immunoglobulin genes
Molecular functions
- 5'-deoxyribose-5-phosphate lyase activity
- DNA binding
- DNA-directed DNA polymerase activity
- metal ion binding
Cellular components
Protein domainsUniProt · Pfam · InterPro
- BRCT domain
- DNA polymerase family X, beta-like
- DNA-directed DNA polymerase X
- Crossover junction endonuclease MUS81-like, HHH domain
- DNA polymerase lambda, fingers domain
- DNA polymerase family X, binding site
- DNA polymerase family X
- DNA polymerase lambda lyase domain superfamily
- DNA polymerase beta, palm domain
- DNA polymerase beta, thumb domain
- BRCT domain superfamily
- DNA polymerase, thumb domain superfamily
- Nucleotidyltransferase superfamily
- Fingers domain of DNA polymerase lambda
- Helix-hairpin-helix domain
- DNA polymerase beta thumb
- DNA polymerase beta palm
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of POLL in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads POLL as an antibody target. Whether an autoantibody or antibody against POLL could matter depends on whether native POLL is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
POLL is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label POLL as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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