NXN
Nucleoredoxin
Also known as: FLJ12614, NRX, NXN_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q6DKJ4
- Gene
- NXN
- Ensembl
- ENSG00000167693
- Chromosome
- 17
- Canonical length
- 435 aa
- Protein class
- Disease related genes, Enzymes, Human disease related genes, Potential drug targets, Predicted intracellular proteins
- Subcellular location
- Cytosol
OverviewNCBI Gene
This gene encodes a member of the thioredoxin superfamily, a group of small, multifunctional redox-active proteins. Members of this family are characterized by a conserved active motif called the thioredoxin fold that catalyzes disulfide bond formation and isomerization. The encoded protein acts a redox-dependent regulator of the Wnt signaling pathway and is involved in cell growth and differentiation. [provided by RefSeq, Sep 2015]
Canonical amino-acid sequenceUniProt
435 residues, UniProt reviewed canonical sequence.
>Q6DKJ4|NXN
1 MSGFLEELLG EKLVTGGGEE VDVHSLGARG ISLLGLYFGC SLSAPCAQLS ASLAAFYGRL
61 RGDAAAGPGP GAGAGAAAEP EPRRRLEIVF VSSDQDQRQW QDFVRDMPWL ALPYKEKHRK
121 LKLWNKYRIS NIPSLIFLDA TTGKVVCRNG LLVIRDDPEG LEFPWGPKPF REVIAGPLLR
181 NNGQSLESSS LEGSHVGVYF SAHWCPPCRS LTRVLVESYR KIKEAGQNFE IIFVSADRSE
241 ESFKQYFSEM PWLAVPYTDE ARRSRLNRLY GIQGIPTLIM LDPQGEVITR QGRVEVLNDE
301 DCREFPWHPK PVLELSDSNA AQLNEGPCLV LFVDSEDDGE SEAAKQLIQP IAEKIIAKYK
361 AKEEEAPLLF FVAGEDDMTD SLRDYTNLPE AAPLLTILDM SARAKYVMDV EEITPAIVEA
421 FVNDFLAEKL KPEPILocalizationUniProt · AlphaFold · HPA
Whether an antibody against NXN can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.27
- Highest tissue expression
- 95 nTPM
Expression across tissuesHPA
Tissue
- skeletal muscle: 95 nTPM
- colon: 66 nTPM
- endometrium: 45 nTPM
- urinary bladder: 43 nTPM
- vagina: 41 nTPM
- prostate: 38 nTPM
Single-cell type
- endometrial secretory cells: 508 nCPM
- myonuclei: 447 nCPM
- lymphatic endothelial cells: 351 nCPM
- alveolar cells type 1: 346 nCPM
- ocular epithelial cells: 341 nCPM
- endometrial stromal cells: 324 nCPM
Immune cell
- basophil: 0.2 nTPM
- myeloid DC: 0.2 nTPM
- naive CD4 T-cell: 0.2 nTPM
- neutrophil: 0.2 nTPM
- NK-cell: 0.2 nTPM
- plasmacytoid DC: 0.2 nTPM
Brain region
- choroid plexus: 33 nTPM
- thalamus: 23 nTPM
- midbrain: 18 nTPM
- hypothalamus: 18 nTPM
- amygdala: 17 nTPM
- pons: 16 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about NXN.
Disease | AllUniProt
Conditions NXN is implicated in, by any mechanism.
- Robinow syndrome, autosomal recessive 2 (RRS2) MIM:618529
Disease | GeneticClinVar
8 pathogenic / likely-pathogenic of 265 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Robinow syndrome, autosomal recessive 2
- Distal shortening of limbs
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.22
- gnomAD pLI
- 1
- gnomAD missense Z
- 2.18
- DepMap mean gene effect
- 0.08
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cell differentiation
- circulatory system development
- in utero embryonic development
- negative regulation of protein ubiquitination
- negative regulation of Wnt signaling pathway
- Wnt signaling pathway
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Thioredoxin-like fold
- Thioredoxin domain
- Thioredoxin-like superfamily
- Thioredoxin-like domain
- Thioredoxin-like
- Nucleoredoxin, redox inactive TRX-like domain b'
- TryX and NRX, thioredoxin domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of NXN in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads NXN as an antibody target. Whether an autoantibody or antibody against NXN could matter depends on whether native NXN is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
NXN is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label NXN as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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