MYO1F
Unconventional myosin-If
Also known as: MYO1F_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- O00160
- Gene
- MYO1F
- Ensembl
- ENSG00000142347
- Chromosome
- 19
- Canonical length
- 1098 aa
- Protein class
- Disease related genes, Plasma proteins, Predicted intracellular proteins
- Subcellular location
- Cytosol
OverviewNCBI Gene
Myosins are molecular motors that use the energy from ATP hydrolysis to generate force on actin filaments. The protein encoded by this gene is an unconventional myosin that may be involved in the intracellular movement of membrane-enclosed compartments. There is evidence to suggest that mutations in this gene can result in hearing loss. [provided by RefSeq, Jan 2017]
Canonical amino-acid sequenceUniProt
1098 residues, UniProt reviewed canonical sequence.
>O00160|MYO1F
1 MGSKERFHWQ SHNVKQSGVD DMVLLPQITE DAIAANLRKR FMDDYIFTYI GSVLISVNPF
61 KQMPYFTDRE IDLYQGAAQY ENPPHIYALT DNMYRNMLID CENQCVIISG ESGAGKTVAA
121 KYIMGYISKV SGGGEKVQHV KDIILQSNPL LEAFGNAKTV RNNNSSRFGK YFEIQFSRGG
181 EPDGGKISNF LLEKSRVVMQ NENERNFHIY YQLLEGASQE QRQNLGLMTP DYYYYLNQSD
241 TYQVDGTDDR SDFGETLSAM QVIGIPPSIQ QLVLQLVAGI LHLGNISFCE DGNYARVESV
301 DLLAFPAYLL GIDSGRLQEK LTSRKMDSRW GGRSESINVT LNVEQAAYTR DALAKGLYAR
361 LFDFLVEAIN RAMQKPQEEY SIGVLDIYGF EIFQKNGFEQ FCINFVNEKL QQIFIELTLK
421 AEQEEYVQEG IRWTPIQYFN NKVVCDLIEN KLSPPGIMSV LDDVCATMHA TGGGADQTLL
481 QKLQAAVGTH EHFNSWSAGF VIHHYAGKVS YDVSGFCERN RDVLFSDLIE LMQTSEQAFL
541 RMLFPEKLDG DKKGRPSTAG SKIKKQANDL VATLMRCTPH YIRCIKPNET KRPRDWEENR
601 VKHQVEYLGL KENIRVRRAG FAYRRQFAKF LQRYAILTPE TWPRWRGDER QGVQHLLRAV
661 NMEPDQYQMG STKVFVKNPE SLFLLEEVRE RKFDGFARTI QKAWRRHVAV RKYEEMREEA
721 SNILLNKKER RRNSINRNFV GDYLGLEERP ELRQFLGKRE RVDFADSVTK YDRRFKPIKR
781 DLILTPKCVY VIGREKVKKG PEKGQVCEVL KKKVDIQALR GVSLSTRQDD FFILQEDAAD
841 SFLESVFKTE FVSLLCKRFE EATRRPLPLT FSDTLQFRVK KEGWGGGGTR SVTFSRGFGD
901 LAVLKVGGRT LTVSVGDGLP KSSKPTRKGM AKGKPRRSSQ APTRAAPAPP RGMDRNGVPP
961 SARGGPLPLE IMSGGGTHRP PRGPPSTSLG ASRRPRARPP SEHNTEFLNV PDQGMAGMQR
1021 KRSVGQRPVP GVGRPKPQPR THGPRCRALY QYVGQDVDEL SFNVNEVIEI LMEDPSGWWK
1081 GRLHGQEGLF PGNYVEKILocalizationUniProt · AlphaFold · HPA
Whether an antibody against MYO1F can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.31
- Highest tissue expression
- 93 nTPM
Expression across tissuesHPA
Tissue
- spleen: 93 nTPM
- bone marrow: 91 nTPM
- appendix: 37 nTPM
- lung: 29 nTPM
- lymph node: 19 nTPM
- small intestine: 14 nTPM
Single-cell type
- neutrophils: 2,677 nCPM
- neutrophil progenitors: 873 nCPM
- kupffer cells: 546 nCPM
- monocytes: 481 nCPM
- monocyte progenitors: 375 nCPM
- nk-cells: 368 nCPM
Immune cell
- neutrophil: 264 nTPM
- classical monocyte: 108 nTPM
- eosinophil: 106 nTPM
- total PBMC: 101 nTPM
- non-classical monocyte: 99 nTPM
- intermediate monocyte: 79 nTPM
Brain region
- white matter: 17 nTPM
- medulla oblongata: 15 nTPM
- thalamus: 14 nTPM
- pons: 14 nTPM
- spinal cord: 11 nTPM
- cerebral cortex: 9.3 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.51
- gnomAD pLI
- 0
- gnomAD missense Z
- 1.76
- DepMap mean gene effect
- -0.02
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- SH3 domain
- Myosin head, motor domain-like
- Class I myosin tail homology domain
- P-loop containing nucleoside triphosphate hydrolase
- Unconventional myosin-Ie/If, SH3 domain
- SH3-like domain superfamily
- Class I myosin, motor domain
- Kinesin motor domain superfamily
- SH3 domain
- Myosin head (motor domain)
- Unconventional myosin tail, actin- and lipid-binding
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of MYO1F in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads MYO1F as an antibody target. Whether an autoantibody or antibody against MYO1F could matter depends on whether native MYO1F is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
MYO1F is annotated at the cell surface, where native MYO1F is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label MYO1F as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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