IGSF8
Immunoglobulin superfamily member 8
Also known as: CD316, CD81P3, EWI2, IGSF8_HUMAN, PGRL
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q969P0
- Gene
- IGSF8
- Ensembl
- ENSG00000162729
- Chromosome
- 1
- Canonical length
- 613 aa
- Protein class
- CD markers, Predicted intracellular proteins, Predicted membrane proteins
- Subcellular location
- Vesicles
OverviewNCBI Gene
This gene encodes a member the EWI subfamily of the immunoglobulin protein superfamily. Members of this family contain a single transmembrane domain, an EWI (Glu-Trp-Ile)-motif and a variable number of immunoglobulin domains. This protein interacts with the tetraspanins CD81 and CD9 and may regulate their role in certain cellular functions including cell migration and viral infection. The encoded protein may also function as a tumor suppressor by inhibiting the proliferation of certain cancers. Alternate splicing results in multiple transcript variants that encode the same protein. [provided by RefSeq, Sep 2011]
Canonical amino-acid sequenceUniProt
613 residues, UniProt reviewed canonical sequence.
>Q969P0|IGSF8
1 MGALRPTLLP PSLPLLLLLM LGMGCWAREV LVPEGPLYRV AGTAVSISCN VTGYEGPAQQ
61 NFEWFLYRPE APDTALGIVS TKDTQFSYAV FKSRVVAGEV QVQRLQGDAV VLKIARLQAQ
121 DAGIYECHTP STDTRYLGSY SGKVELRVLP DVLQVSAAPP GPRGRQAPTS PPRMTVHEGQ
181 ELALGCLART STQKHTHLAV SFGRSVPEAP VGRSTLQEVV GIRSDLAVEA GAPYAERLAA
241 GELRLGKEGT DRYRMVVGGA QAGDAGTYHC TAAEWIQDPD GSWAQIAEKR AVLAHVDVQT
301 LSSQLAVTVG PGERRIGPGE PLELLCNVSG ALPPAGRHAA YSVGWEMAPA GAPGPGRLVA
361 QLDTEGVGSL GPGYEGRHIA MEKVASRTYR LRLEAARPGD AGTYRCLAKA YVRGSGTRLR
421 EAASARSRPL PVHVREEGVV LEAVAWLAGG TVYRGETASL LCNISVRGGP PGLRLAASWW
481 VERPEDGELS SVPAQLVGGV GQDGVAELGV RPGGGPVSVE LVGPRSHRLR LHSLGPEDEG
541 VYHCAPSAWV QHADYSWYQA GSARSGPVTV YPYMHALDTL FVPLLVGTGV ALVTGATVLG
601 TITCCFMKRL RKRLocalizationUniProt · AlphaFold · HPA
Whether an antibody against IGSF8 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 1
- Mean surface accessibility (rSASA)
- 0.32
- Highest tissue expression
- 154 nTPM
Expression across tissuesHPA
Tissue
- spinal cord: 154 nTPM
- cerebellum: 137 nTPM
- cerebral cortex: 134 nTPM
- hippocampal formation: 109 nTPM
- basal ganglia: 95 nTPM
- midbrain: 86 nTPM
Single-cell type
- extravillous trophoblasts: 308 nCPM
- oligodendrocytes: 127 nCPM
- müller glia: 93 nCPM
- syncytiotrophoblasts: 86 nCPM
- epididymal principal cells: 78 nCPM
- brain excitatory neurons: 63 nCPM
Immune cell
- T-reg: 27 nTPM
- naive CD8 T-cell: 26 nTPM
- memory CD8 T-cell: 26 nTPM
- naive CD4 T-cell: 24 nTPM
- naive B-cell: 23 nTPM
- gdT-cell: 22 nTPM
Brain region
- white matter: 261 nTPM
- cerebral cortex: 194 nTPM
- medulla oblongata: 177 nTPM
- basal ganglia: 171 nTPM
- pons: 155 nTPM
- spinal cord: 154 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.05
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.44
- DepMap mean gene effect
- -0.08
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 8% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cell motility
- nervous system development
- positive regulation of cell migration
- single fertilization
- skeletal muscle tissue development
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of IGSF8 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads IGSF8 as an antibody target. Whether an autoantibody or antibody against IGSF8 could matter depends on whether native IGSF8 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
IGSF8 is annotated at the cell surface, where native IGSF8 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label IGSF8 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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