IFNAR2
Interferon alpha/beta receptor 2
Also known as: IFNABR, INAR2_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P48551
- Gene
- IFNAR2
- Ensembl
- ENSG00000159110
- Chromosome
- 21
- Canonical length
- 515 aa
- Protein class
- Cancer-related genes, Disease related genes, FDA approved drug targets, Human disease related genes, Predicted intracellular proteins, Predicted membrane proteins, Predicted secreted proteins
- Secretome location
- Secreted to blood
OverviewNCBI Gene
The protein encoded by this gene is a type I membrane protein that forms one of the two chains of a receptor for interferons alpha and beta. Binding and activation of the receptor stimulates Janus protein kinases, which in turn phosphorylate several proteins, including STAT1 and STAT2. The protein belongs to the type II cytokine receptor family. Mutations in this gene are associated with Immunodeficiency 45. [provided by RefSeq, Jul 2020]
Canonical amino-acid sequenceUniProt
515 residues, UniProt reviewed canonical sequence.
>P48551|IFNAR2
1 MLLSQNAFIF RSLNLVLMVY ISLVFGISYD SPDYTDESCT FKISLRNFRS ILSWELKNHS
61 IVPTHYTLLY TIMSKPEDLK VVKNCANTTR SFCDLTDEWR STHEAYVTVL EGFSGNTTLF
121 SCSHNFWLAI DMSFEPPEFE IVGFTNHINV MVKFPSIVEE ELQFDLSLVI EEQSEGIVKK
181 HKPEIKGNMS GNFTYIIDKL IPNTNYCVSV YLEHSDEQAV IKSPLKCTLL PPGQESESAE
241 SAKIGGIITV FLIALVLTST IVTLKWIGYI CLRNSLPKVL NFHNFLAWPF PNLPPLEAMD
301 MVEVIYINRK KKVWDYNYDD ESDSDTEAAP RTSGGGYTMH GLTVRPLGQA SATSTESQLI
361 DPESEEEPDL PEVDVELPTM PKDSPQQLEL LSGPCERRKS PLQDPFPEED YSSTEGSGGR
421 ITFNVDLNSV FLRVLDDEDS DDLEAPLMLS SHLEEMVDPE DPDNVQSNHL LASGEGTQPT
481 FPSPSSEGLW SEDAPSDQSD TSESDVDLGD GYIMRLocalizationUniProt · AlphaFold · HPA
Whether an antibody against IFNAR2 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 1
- Mean surface accessibility (rSASA)
- 0.53
- Highest tissue expression
- 33 nTPM
Expression across tissuesHPA
Tissue
- spleen: 33 nTPM
- urinary bladder: 30 nTPM
- tonsil: 29 nTPM
- lymph node: 27 nTPM
- thymus: 25 nTPM
- appendix: 25 nTPM
Single-cell type
- plasma cells: 73 nCPM
- extravillous trophoblasts: 67 nCPM
- oligodendrocyte progenitor cells: 51 nCPM
- microglia: 47 nCPM
- brain inhibitory neurons: 40 nCPM
- oligodendrocytes: 39 nCPM
Immune cell
- plasmacytoid DC: 90 nTPM
- neutrophil: 87 nTPM
- T-reg: 60 nTPM
- eosinophil: 54 nTPM
- non-classical monocyte: 52 nTPM
- intermediate monocyte: 49 nTPM
Brain region
- medulla oblongata: 29 nTPM
- thalamus: 28 nTPM
- pons: 26 nTPM
- hypothalamus: 25 nTPM
- midbrain: 24 nTPM
- spinal cord: 24 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about IFNAR2.
Disease | AllUniProt
Conditions IFNAR2 is implicated in, by any mechanism.
- Immunodeficiency 45 (IMD45) MIM:616669
Disease | GeneticClinVar
13 pathogenic / likely-pathogenic of 339 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.12
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.26
- DepMap mean gene effect
- 0.12
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cell surface receptor signaling pathway
- cell surface receptor signaling pathway via JAK-STAT
- cellular response to interferon-beta
- cellular response to virus
- defense response to virus
- response to interferon-alpha
- response to interferon-beta
- response to virus
- type I interferon-mediated signaling pathway
Molecular functions
- cytokine binding
- JAK pathway signal transduction adaptor activity
- protein kinase binding
- type I interferon binding
- type I interferon receptor activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of IFNAR2 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads IFNAR2 as an antibody target. Whether an autoantibody or antibody against IFNAR2 could matter depends on whether native IFNAR2 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
IFNAR2 is annotated at the cell surface, where native IFNAR2 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label IFNAR2 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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