GOLGA1
Golgin subfamily A member 1
Also known as: GOGA1_HUMAN, golgin-97, MGC33154
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q92805
- Gene
- GOLGA1
- Ensembl
- ENSG00000136935
- Chromosome
- 9
- Canonical length
- 767 aa
- Protein class
- Plasma proteins, Predicted intracellular proteins
- Subcellular location
- Golgi apparatus
OverviewNCBI Gene
The Golgi apparatus, which participates in glycosylation and transport of proteins and lipids in the secretory pathway, consists of a series of stacked cisternae (flattened membrane sacs). Interactions between the Golgi and microtubules are thought to be important for the reorganization of the Golgi after it fragments during mitosis. This gene encodes one of the golgins, a family of proteins localized to the Golgi. This encoded protein is associated with Sjogren's syndrome. [provided by RefSeq, Feb 2010]
Canonical amino-acid sequenceUniProt
767 residues, UniProt reviewed canonical sequence.
>Q92805|GOLGA1
1 MFAKLKKKIA EETAVAQRPG GATRIPRSVS KESVASMGAD SGDDFASDGS SSREDLSSQL
61 LRRNEQIRKL EARLSDYAEQ VRNLQKIKEK LEIALEKHQD SSMRKFQEQN ETFQANRAKM
121 AEGLALALAR KDQEWSEKMD QLEKEKNILT AQLQEMKNQS MNLFQRRDEM DELEGFQQQE
181 LSKIKHMLLK KEESLGKMEQ ELEARTRELS RTQEELMNSN QMSSDLSQKL EELQRHYSTL
241 EEQRDHVIAS KTGAESKITA LEQKEQELQA LIQQLSIDLQ KVTAETQEKE DVITHLQEKV
301 ASLEKRLEQN LSGEEHLQEL LKEKTLAEQN LEDTRQQLLA ARSSQAKAIN TLETRVRELE
361 QTLQASEEQL QQSKGIVAAQ ETQIQELAAA NQESSHVQQQ ALALEQQFLE RTQALEAQIV
421 ALERTRAADQ TTAEQGMRQL EQENAALKEC RNEYERSLQN HQFELKKLKE EWSQREIVSV
481 AMAQALEEVR KQREEFQQQA ANLTAIIDEK EQNLREKTEV LLQKEQEILQ LERGHNSALL
541 QIHQLQAELE ALRTLKAEEA AVVAEQEDLL RLRGPLQAEA LSVNESHVTS RAMQDPVFQL
601 PTAGRTPNGE VGAMDLTQLQ KEKQDLEQQL LEKNKTIKQM QQRMLELRKT LQKELKIRPD
661 NELFEVREKP GPEMANMAPS VTNNTDLTDA REINFEYLKH VVLKFMSCRE SEAFHLIKAV
721 SVLLNFSQEE ENMLKETLEY KMSWFGSKPA PKGSIRPSIS NPRIPWSLocalizationUniProt · AlphaFold · HPA
Whether an antibody against GOLGA1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Other membrane
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.53
- Highest tissue expression
- 35 nTPM
Expression across tissuesHPA
Tissue
- retina: 35 nTPM
- testis: 14 nTPM
- skeletal muscle: 12 nTPM
- urinary bladder: 10 nTPM
- skin: 10 nTPM
- colon: 10 nTPM
Single-cell type
- cone photoreceptor cells: 186 nCPM
- rod photoreceptor cells: 154 nCPM
- myonuclei: 101 nCPM
- adipocytes: 98 nCPM
- retinal ganglion cells: 97 nCPM
- retinal horizontal cells: 80 nCPM
Immune cell
- basophil: 8.1 nTPM
- neutrophil: 7.7 nTPM
- plasmacytoid DC: 4.6 nTPM
- memory CD8 T-cell: 4.5 nTPM
- eosinophil: 4.3 nTPM
- gdT-cell: 4.2 nTPM
Brain region
- white matter: 19 nTPM
- choroid plexus: 16 nTPM
- basal ganglia: 16 nTPM
- pons: 15 nTPM
- thalamus: 15 nTPM
- medulla oblongata: 14 nTPM
ReferencesPubMed · IEDB
Publications for GOLGA1 from three distinct lines of evidence, kept separate because they answer different questions: whether antibodies are directed at the protein, whether a B-cell epitope has been mapped on it, and whether a T-cell epitope has. Each is labelled with its source.
Reference: AutoantibodyPubMed
2 publications
- Molecular cloning of a novel 97-kd Golgi complex autoantigen associated with Sjögren's syndrome.
1997 · Arthritis Rheum · RCR 2.9 · 147 citations - Autoantigen Golgin-97, an effector of Arl1 GTPase, participates in traffic from the endosome to the trans-golgi network.
2004 · Mol Biol Cell · RCR 2.6 · 151 citations
Sources: PubMed — antigen-level antibody evidence from a custom retrieval. Records matching a controlled set of autoantibody terms (the MeSH descriptors Autoantibodies and Autoantigens, with title and abstract term variants) were obtained through NCBI E-utilities, and their titles and abstracts parsed for constructions that direct an antibody at a named protein rather than for co-occurrence. Captured names were resolved against UniProt nomenclature and each antigen adjudicated individually against the source text. Bibliographic records from PubMed and MeSH, U.S. National Library of Medicine; citation metrics from NIH iCite (Hutchins et al., PLoS Biology 2016). Titles link to PubMed; abstracts are not reproduced here. The NLM does not endorse this analysis.
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.54
- gnomAD pLI
- 0
- gnomAD missense Z
- 1.28
- DepMap mean gene effect
- -0.1
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of GOLGA1 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads GOLGA1 as an antibody target. Whether an autoantibody or antibody against GOLGA1 could matter depends on whether native GOLGA1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
GOLGA1 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label GOLGA1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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