FRK
Tyrosine-protein kinase FRK
Also known as: FRK_HUMAN, GTK, PTK5, RAK
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P42685
- Gene
- FRK
- Ensembl
- ENSG00000111816
- Chromosome
- 6
- Canonical length
- 505 aa
- Protein class
- Enzymes, FDA approved drug targets, Plasma proteins, Predicted intracellular proteins
- Subcellular location
- Nucleoplasm,Cytosol
OverviewNCBI Gene
The protein encoded by this gene belongs to the TYR family of protein kinases. This tyrosine kinase is a nuclear protein and may function during G1 and S phase of the cell cycle and suppress growth. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
505 residues, UniProt reviewed canonical sequence.
>P42685|FRK
1 MSNICQRLWE YLEPYLPCLS TEADKSTVIE NPGALCSPQS QRHGHYFVAL FDYQARTAED
61 LSFRAGDKLQ VLDTLHEGWW FARHLEKRRD GSSQQLQGYI PSNYVAEDRS LQAEPWFFGA
121 IGRSDAEKQL LYSENKTGSF LIRESESQKG EFSLSVLDGA VVKHYRIKRL DEGGFFLTRR
181 RIFSTLNEFV SHYTKTSDGL CVKLGKPCLK IQVPAPFDLS YKTVDQWEID RNSIQLLKRL
241 GSGQFGEVWE GLWNNTTPVA VKTLKPGSMD PNDFLREAQI MKNLRHPKLI QLYAVCTLED
301 PIYIITELMR HGSLQEYLQN DTGSKIHLTQ QVDMAAQVAS GMAYLESRNY IHRDLAARNV
361 LVGEHNIYKV ADFGLARVFK VDNEDIYESR HEIKLPVKWT APEAIRSNKF SIKSDVWSFG
421 ILLYEIITYG KMPYSGMTGA QVIQMLAQNY RLPQPSNCPQ QFYNIMLECW NAEPKERPTF
481 ETLRWKLEDY FETDSSYSDA NNFIRLocalizationUniProt · AlphaFold · HPA
Whether an antibody against FRK can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.29
- Highest tissue expression
- 8.4 nTPM
Expression across tissuesHPA
Tissue
- kidney: 8.4 nTPM
- liver: 6.2 nTPM
- small intestine: 5.9 nTPM
- duodenum: 5.8 nTPM
- choroid plexus: 4.8 nTPM
- stomach: 4.6 nTPM
Single-cell type
- choroid plexus epithelial cells: 498 nCPM
- renal collecting duct intercalated cells: 266 nCPM
- renal connecting tubule cells: 178 nCPM
- distal convoluted tubule cells: 173 nCPM
- proximal tubule cells: 139 nCPM
- renal collecting duct principal cells: 137 nCPM
Immune cell
- basophil: 0.9 nTPM
- neutrophil: 0.7 nTPM
- MAIT T-cell: 0.5 nTPM
- gdT-cell: 0.4 nTPM
- naive B-cell: 0.4 nTPM
- memory CD4 T-cell: 0.3 nTPM
Brain region
- choroid plexus: 60 nTPM
- cerebellum: 40 nTPM
- white matter: 39 nTPM
- cerebral cortex: 39 nTPM
- hippocampal formation: 32 nTPM
- basal ganglia: 31 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.08
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.69
- DepMap mean gene effect
- 0
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cell differentiation
- cell surface receptor protein tyrosine kinase signaling pathway
- negative regulation of transcription by RNA polymerase II
Molecular functions
- ATP binding
- non-membrane spanning protein tyrosine kinase activity
- protein tyrosine kinase activity
- signaling receptor binding
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Protein kinase domain
- SH2 domain
- Serine-threonine/tyrosine-protein kinase, catalytic domain
- SH3 domain
- Tyrosine-protein kinase, active site
- Protein kinase-like domain superfamily
- Protein kinase, ATP binding site
- Tyrosine-protein kinase, catalytic domain
- SH3-like domain superfamily
- SH2 domain superfamily
- Non-receptor tyrosine kinases involved in cell signaling
- SH2 domain
- SH3 domain
- Protein tyrosine and serine/threonine kinase
- Tyrosine-protein kinase Frk, SH2 domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of FRK in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads FRK as an antibody target. Whether an autoantibody or antibody against FRK could matter depends on whether native FRK is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
FRK is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label FRK as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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