ETV7
Transcription factor ETV7
Also known as: ETV7_HUMAN, TEL-2, TEL2
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9Y603
- Gene
- ETV7
- Ensembl
- ENSG00000010030
- Chromosome
- 6
- Canonical length
- 341 aa
- Protein class
- Predicted intracellular proteins, Transcription factors
- Subcellular location
- Nucleoplasm
OverviewNCBI Gene
The protein encoded by this gene belongs to the ETS family of transcription factors, which is a large group of evolutionarily conserved transcriptional regulators that play an important role in a variety of cellular processes throughout development and differentiation, and are involved in oncogenesis as well. This protein is predominantly expressed in hematopoietic tissues. Several alternatively spliced transcript variants encoding different isoforms have been described for this gene (PMID:11108721).[provided by RefSeq, May 2011]
Canonical amino-acid sequenceUniProt
341 residues, UniProt reviewed canonical sequence.
>Q9Y603|ETV7
1 MQEGELAISP ISPVAAMPPL GTHVQARCEA QINLLGEGGI CKLPGRLRIQ PALWSREDVL
61 HWLRWAEQEY SLPCTAEHGF EMNGRALCIL TKDDFRHRAP SSGDVLYELL QYIKTQRRAL
121 VCGPFFGGIF RLKTPTQHSP VPPEEVTGPS QMDTRRGHLL QPPDPGLTSN FGHLDDPGLA
181 RWTPGKEESL NLCHCAELGC RTQGVCSFPA MPQAPIDGRI ADCRLLWDYV YQLLLDTRYE
241 PYIKWEDKDA KIFRVVDPNG LARLWGNHKN RVNMTYEKMS RALRHYYKLN IIKKEPGQKL
301 LFRFLKTPGK MVQDKHSHLE PLESQEQDRI EFKDKRPEIS PLocalizationUniProt · AlphaFold · HPA
Whether an antibody against ETV7 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.45
- Highest tissue expression
- 15 nTPM
Expression across tissuesHPA
Tissue
- duodenum: 15 nTPM
- skin: 15 nTPM
- small intestine: 12 nTPM
- salivary gland: 8.1 nTPM
- appendix: 6.5 nTPM
- stomach: 5.9 nTPM
Single-cell type
- differentiating spermatogonia: 63 nCPM
- cytotrophoblasts: 38 nCPM
- tuft cells: 35 nCPM
- migrating cytotrophoblasts: 24 nCPM
- enterocytes: 21 nCPM
- epicardial cells: 21 nCPM
Immune cell
- neutrophil: 19 nTPM
- T-reg: 16 nTPM
- intermediate monocyte: 5.7 nTPM
- memory CD4 T-cell: 5.4 nTPM
- MAIT T-cell: 3.9 nTPM
- classical monocyte: 3.8 nTPM
Brain region
- medulla oblongata: 3.1 nTPM
- pons: 2.8 nTPM
- spinal cord: 2.8 nTPM
- hippocampal formation: 1.6 nTPM
- amygdala: 1.5 nTPM
- basal ganglia: 1.5 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about ETV7.
Disease | ImmuneIEDB
Conditions an epitope on ETV7 was assayed in.
- melanoma T cell
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.53
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.21
- DepMap mean gene effect
- -0.05
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- animal organ morphogenesis
- cell differentiation
- negative regulation of transcription by RNA polymerase II
- regulation of transcription by RNA polymerase II
- transcription by RNA polymerase II
Molecular functions
- DNA-binding transcription factor activity, RNA polymerase II-specific
- DNA-binding transcription repressor activity, RNA polymerase II-specific
- RNA polymerase II transcription regulatory region sequence-specific DNA binding
- sequence-specific double-stranded DNA binding
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of ETV7 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads ETV7 as an antibody target. Whether an autoantibody or antibody against ETV7 could matter depends on whether native ETV7 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
ETV7 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label ETV7 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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