Seroatlas · Human Serome Atlas

C1QTNF9

Complement C1q and tumor necrosis factor-related protein 9A

Also known as: AQL1, C1QTNF9A, C1T9A_HUMAN, CTRP9, MGC48915

Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene

Protein identityUniProt · HPA

UniProt accession
P0C862
Gene
C1QTNF9
Ensembl
ENSG00000240654
Chromosome
13
Canonical length
333 aa
Protein class
Predicted secreted proteins, Transporters
Secretome location
Secreted to blood

OverviewNCBI Gene

Enables identical protein binding activity. Predicted to be involved in signal transduction. Predicted to be located in extracellular region. Predicted to be part of collagen trimer. [provided by Alliance of Genome Resources, Jul 2025]

Canonical amino-acid sequenceUniProt

333 residues, UniProt reviewed canonical sequence.

>P0C862|C1QTNF9
     1  MRIWWLLLAI EICTGNINSQ DTCRQGHPGI PGNPGHNGLP GRDGRDGAKG DKGDAGEPGR
    61  PGSPGKDGTS GEKGERGADG KVEAKGIKGD QGSRGSPGKH GPKGLAGPMG EKGLRGETGP
   121  QGQKGNKGDV GPTGPEGPRG NIGPLGPTGL PGPMGPIGKP GPKGEAGPTG PQGEPGVRGI
   181  RGWKGDRGEK GKIGETLVLP KSAFTVGLTV LSKFPSSDMP IKFDKILYNE FNHYDTAAGK
   241  FTCHIAGVYY FTYHITVFSR NVQVSLVKNG VKILHTKDAY MSSEDQASGG IVLQLKLGDE
   301  VWLQVTGGER FNGLFADEDD DTTFTGFLLF SSP

LocalizationUniProt · AlphaFold · HPA

Whether an antibody against C1QTNF9 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.

Antibody reachability
Secreted
Secreted
Yes
Transmembrane segments
0
Mean surface accessibility (rSASA)
0.55
Highest tissue expression
7.9 nTPM

Expression across tissuesHPA

Tissue

  • skeletal muscle: 7.9 nTPM
  • heart muscle: 3.8 nTPM
  • tongue: 3.1 nTPM
  • adipose tissue: 2.9 nTPM
  • skin: 2 nTPM
  • colon: 1.5 nTPM

Single-cell type

  • vascular endothelial cells: 5.3 nCPM
  • early spermatids: 2.3 nCPM
  • undifferentiated spermatogonia: 2 nCPM
  • late primary spermatocytes: 1.4 nCPM
  • late spermatids: 1.3 nCPM
  • pdcs: 1.3 nCPM

Immune cell

  • basophil: 0 nTPM
  • classical monocyte: 0 nTPM
  • eosinophil: 0 nTPM
  • gdT-cell: 0 nTPM
  • intermediate monocyte: 0 nTPM
  • MAIT T-cell: 0 nTPM

Brain region

  • hippocampal formation: 6.5 nTPM
  • hypothalamus: 3.5 nTPM
  • basal ganglia: 3.2 nTPM
  • cerebellum: 3.2 nTPM
  • cerebral cortex: 3.2 nTPM
  • white matter: 3.1 nTPM

Genetic constraint and essentialitygnomAD · DepMap

Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.

gnomAD LOEUF (loss-of-function intolerance)
1.29
gnomAD pLI
0
gnomAD missense Z
0.57
DepMap mean gene effect
-0.18
DepMap dependency class
selective

Cancer expressionTCGA

Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).

OntologyGO

Molecular functions

Cellular components

Protein domainsUniProt · Pfam · InterPro

KeywordsUniProt

InteractionsUniProt · HPA

Protein binding partners of C1QTNF9 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.

Antibody and autoantibody relevanceSeroatlas analysis

Seroatlas reads C1QTNF9 as an antibody target. Whether an autoantibody or antibody against C1QTNF9 could matter depends on whether native C1QTNF9 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.

C1QTNF9 is annotated as secreted, so native C1QTNF9 circulates and is directly accessible to antibodies. Secreted and cell-surface proteins are the autoantibody targets most likely to act like drugs, blocking or depleting the native protein.

Annotation status

The present source text does not explicitly label C1QTNF9 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.

Canonical record: https://seroatlas.com/gene/C1QTNF9. Study-independent annotations aggregated from UniProt, Human Protein Atlas, PubMed, IEDB, Pfam, InterPro, Gene Ontology, AlphaFold, gnomAD, DepMap, ClinVar, TCGA. Catalog release seroatlas-reviewed-human-uniprot-20260313.

Seroatlas is the reference for exploring autoantibody and antibody serology at the human-protein level: the autoreactome and human serome, multiplex serology (HuProt, HuScan, VirScan, PhIP-Seq).

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